Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CYP46A1Q9Y6A2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CYP46A1Q9Y6A2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CYP46A1Q9Y6A2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CYP46A1Q9Y6A2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.91■■□□□ 1.9
CYP46A1Q9Y6A2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CYP46A1Q9Y6A2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CYP46A1Q9Y6A2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CYP46A1Q9Y6A2 AC137630.3-201ENST00000607245 391 ntBASIC26.9■■□□□ 1.9
CYP46A1Q9Y6A2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CYP46A1Q9Y6A2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CYP46A1Q9Y6A2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CYP46A1Q9Y6A2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.9
CYP46A1Q9Y6A2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.89■■□□□ 1.9
CYP46A1Q9Y6A2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.89■■□□□ 1.9
CYP46A1Q9Y6A2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CYP46A1Q9Y6A2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.88■■□□□ 1.89
CYP46A1Q9Y6A2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 DUSP8P3-201ENST00000399571 1760 ntBASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.87■■□□□ 1.89
CYP46A1Q9Y6A2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 SNX5-217ENST00000606557 1087 ntBASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CYP46A1Q9Y6A2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.85■■□□□ 1.89
CYP46A1Q9Y6A2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CYP46A1Q9Y6A2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CYP46A1Q9Y6A2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CYP46A1Q9Y6A2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CYP46A1Q9Y6A2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.83■■□□□ 1.89
CYP46A1Q9Y6A2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.83■■□□□ 1.89
CYP46A1Q9Y6A2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CYP46A1Q9Y6A2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CYP46A1Q9Y6A2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.83■■□□□ 1.89
CYP46A1Q9Y6A2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
CYP46A1Q9Y6A2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
CYP46A1Q9Y6A2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CYP46A1Q9Y6A2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.82■■□□□ 1.88
CYP46A1Q9Y6A2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CYP46A1Q9Y6A2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CYP46A1Q9Y6A2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.81■■□□□ 1.88
CYP46A1Q9Y6A2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CYP46A1Q9Y6A2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.81■■□□□ 1.88
CYP46A1Q9Y6A2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.81■■□□□ 1.88
CYP46A1Q9Y6A2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms