Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHB1Q9Y5F3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB1Q9Y5F3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.68■■□□□ 1.22
PCDHB1Q9Y5F3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB1Q9Y5F3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB1Q9Y5F3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB1Q9Y5F3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB1Q9Y5F3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB1Q9Y5F3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB1Q9Y5F3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB1Q9Y5F3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB1Q9Y5F3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHB1Q9Y5F3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
PCDHB1Q9Y5F3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHB1Q9Y5F3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB1Q9Y5F3 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.64■■□□□ 1.21
PCDHB1Q9Y5F3 AC004448.1-201ENST00000458332 883 ntBASIC22.64■■□□□ 1.21
PCDHB1Q9Y5F3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHB1Q9Y5F3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHB1Q9Y5F3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB1Q9Y5F3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHB1Q9Y5F3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB1Q9Y5F3 ALDH1A3-203ENST00000557963 1670 ntBASIC22.63■■□□□ 1.21
PCDHB1Q9Y5F3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB1Q9Y5F3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB1Q9Y5F3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB1Q9Y5F3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB1Q9Y5F3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 AC133561.4-201ENST00000566112 224 ntBASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB1Q9Y5F3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDHB1Q9Y5F3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB1Q9Y5F3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB1Q9Y5F3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.61■■□□□ 1.21
PCDHB1Q9Y5F3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB1Q9Y5F3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB1Q9Y5F3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
PCDHB1Q9Y5F3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHB1Q9Y5F3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHB1Q9Y5F3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 ZNRF2P3-201ENST00000424200 374 ntBASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB1Q9Y5F3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB1Q9Y5F3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHB1Q9Y5F3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHB1Q9Y5F3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB1Q9Y5F3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB1Q9Y5F3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.58■■□□□ 1.21
PCDHB1Q9Y5F3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms