Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
LRCH1Q9Y2L9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRCH1Q9Y2L9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.51■■□□□ 1.03
LRCH1Q9Y2L9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 DUX4L13-201ENST00000554103 1267 ntBASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 DUX4L15-201ENST00000611059 1267 ntBASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 DUX4L23-201ENST00000615195 1269 ntBASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 DUX4L24-201ENST00000617576 1269 ntBASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 DUX4L22-201ENST00000618238 1269 ntBASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 DUX4L20-201ENST00000619712 1269 ntBASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 DUX4L21-201ENST00000622058 1269 ntBASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 DUX4L10-201ENST00000622460 1267 ntBASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 DUX4L25-201ENST00000624915 1269 ntBASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH1Q9Y2L9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LRCH1Q9Y2L9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRCH1Q9Y2L9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRCH1Q9Y2L9 CR559946.2-201ENST00000623684 991 ntBASIC21.49■■□□□ 1.03
LRCH1Q9Y2L9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRCH1Q9Y2L9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LRCH1Q9Y2L9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 AC016575.1-201ENST00000607026 382 ntBASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.48■■□□□ 1.03
LRCH1Q9Y2L9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH1Q9Y2L9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 MIR639-201ENST00000384974 98 ntBASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.46■■□□□ 1.03
LRCH1Q9Y2L9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 FBXW4P1-201ENST00000426721 2239 ntBASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH1Q9Y2L9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms