Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
LRFN1Q9P244 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.83■□□□□ 0.93
LRFN1Q9P244 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
LRFN1Q9P244 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.83■□□□□ 0.93
LRFN1Q9P244 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRFN1Q9P244 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.83■□□□□ 0.93
LRFN1Q9P244 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRFN1Q9P244 AC142381.2-201ENST00000566120 298 ntBASIC20.83■□□□□ 0.93
LRFN1Q9P244 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.83■□□□□ 0.93
LRFN1Q9P244 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRFN1Q9P244 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRFN1Q9P244 C17orf82-201ENST00000623772 1530 ntBASIC20.83■□□□□ 0.92
LRFN1Q9P244 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.83■□□□□ 0.92
LRFN1Q9P244 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN1Q9P244 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN1Q9P244 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN1Q9P244 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN1Q9P244 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.82■□□□□ 0.92
LRFN1Q9P244 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.82■□□□□ 0.92
LRFN1Q9P244 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN1Q9P244 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN1Q9P244 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN1Q9P244 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.81■□□□□ 0.92
LRFN1Q9P244 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN1Q9P244 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN1Q9P244 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN1Q9P244 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.81■□□□□ 0.92
LRFN1Q9P244 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN1Q9P244 AC020928.2-201ENST00000588717 2197 ntBASIC20.81■□□□□ 0.92
LRFN1Q9P244 EDA-201ENST00000338901 1233 ntBASIC20.81■□□□□ 0.92
LRFN1Q9P244 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.81■□□□□ 0.92
LRFN1Q9P244 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.81■□□□□ 0.92
LRFN1Q9P244 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.81■□□□□ 0.92
LRFN1Q9P244 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.81■□□□□ 0.92
LRFN1Q9P244 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN1Q9P244 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.8■□□□□ 0.92
LRFN1Q9P244 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN1Q9P244 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN1Q9P244 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN1Q9P244 AL355001.2-201ENST00000620617 1191 ntBASIC20.8■□□□□ 0.92
LRFN1Q9P244 AC241377.3-202ENST00000626088 1088 ntBASIC20.8■□□□□ 0.92
LRFN1Q9P244 AC241585.3-202ENST00000628937 1088 ntBASIC20.8■□□□□ 0.92
LRFN1Q9P244 AC245100.8-202ENST00000629247 1058 ntBASIC20.8■□□□□ 0.92
LRFN1Q9P244 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN1Q9P244 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN1Q9P244 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN1Q9P244 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN1Q9P244 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LRFN1Q9P244 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN1Q9P244 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.79■□□□□ 0.92
LRFN1Q9P244 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
LRFN1Q9P244 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LRFN1Q9P244 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.79■□□□□ 0.92
LRFN1Q9P244 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN1Q9P244 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN1Q9P244 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.78■□□□□ 0.92
LRFN1Q9P244 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LRFN1Q9P244 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN1Q9P244 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.78■□□□□ 0.92
LRFN1Q9P244 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN1Q9P244 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN1Q9P244 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN1Q9P244 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN1Q9P244 SERBP1P1-201ENST00000396021 1160 ntBASIC20.78■□□□□ 0.92
LRFN1Q9P244 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN1Q9P244 AL031432.3-201ENST00000607698 485 ntBASIC20.78■□□□□ 0.92
LRFN1Q9P244 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN1Q9P244 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN1Q9P244 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LRFN1Q9P244 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN1Q9P244 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.77■□□□□ 0.92
LRFN1Q9P244 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN1Q9P244 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.77■□□□□ 0.92
LRFN1Q9P244 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN1Q9P244 SUDS3P1-201ENST00000505831 966 ntBASIC20.77■□□□□ 0.92
LRFN1Q9P244 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
LRFN1Q9P244 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.77■□□□□ 0.92
LRFN1Q9P244 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN1Q9P244 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN1Q9P244 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN1Q9P244 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.77■□□□□ 0.91
LRFN1Q9P244 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN1Q9P244 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN1Q9P244 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN1Q9P244 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LRFN1Q9P244 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.76■□□□□ 0.91
LRFN1Q9P244 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN1Q9P244 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.76■□□□□ 0.91
LRFN1Q9P244 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.76■□□□□ 0.91
LRFN1Q9P244 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.76■□□□□ 0.91
LRFN1Q9P244 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN1Q9P244 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN1Q9P244 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN1Q9P244 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN1Q9P244 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LRFN1Q9P244 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN1Q9P244 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN1Q9P244 AL138724.1-201ENST00000606771 1088 ntBASIC20.75■□□□□ 0.91
LRFN1Q9P244 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN1Q9P244 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms