Protein–RNA interactions for Protein: Q9NRJ4

TULP4, Tubby-related protein 4, humanhuman

Predictions only

Length 1,543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4Q9NRJ4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
TULP4Q9NRJ4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
TULP4Q9NRJ4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TULP4Q9NRJ4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.74■■■□□ 2.67
TULP4Q9NRJ4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.74■■■□□ 2.67
TULP4Q9NRJ4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
TULP4Q9NRJ4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
TULP4Q9NRJ4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TULP4Q9NRJ4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TULP4Q9NRJ4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
TULP4Q9NRJ4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
TULP4Q9NRJ4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
TULP4Q9NRJ4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
TULP4Q9NRJ4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.72■■■□□ 2.67
TULP4Q9NRJ4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TULP4Q9NRJ4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
TULP4Q9NRJ4 AC241377.3-202ENST00000626088 1088 ntBASIC31.72■■■□□ 2.67
TULP4Q9NRJ4 AC241585.3-202ENST00000628937 1088 ntBASIC31.72■■■□□ 2.67
TULP4Q9NRJ4 AC245100.8-202ENST00000629247 1058 ntBASIC31.72■■■□□ 2.67
TULP4Q9NRJ4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
TULP4Q9NRJ4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TULP4Q9NRJ4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.71■■■□□ 2.67
TULP4Q9NRJ4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
TULP4Q9NRJ4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TULP4Q9NRJ4 AL162430.1-201ENST00000480705 870 ntBASIC31.7■■■□□ 2.67
TULP4Q9NRJ4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.7■■■□□ 2.67
TULP4Q9NRJ4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.7■■■□□ 2.66
TULP4Q9NRJ4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
TULP4Q9NRJ4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.69■■■□□ 2.66
TULP4Q9NRJ4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TULP4Q9NRJ4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
TULP4Q9NRJ4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.69■■■□□ 2.66
TULP4Q9NRJ4 AC008764.7-201ENST00000593779 1081 ntBASIC31.69■■■□□ 2.66
TULP4Q9NRJ4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.69■■■□□ 2.66
TULP4Q9NRJ4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TULP4Q9NRJ4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TULP4Q9NRJ4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.68■■■□□ 2.66
TULP4Q9NRJ4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.68■■■□□ 2.66
TULP4Q9NRJ4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.68■■■□□ 2.66
TULP4Q9NRJ4 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.68■■■□□ 2.66
TULP4Q9NRJ4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
TULP4Q9NRJ4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.67■■■□□ 2.66
TULP4Q9NRJ4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TULP4Q9NRJ4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.67■■■□□ 2.66
TULP4Q9NRJ4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.67■■■□□ 2.66
TULP4Q9NRJ4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.67■■■□□ 2.66
TULP4Q9NRJ4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TULP4Q9NRJ4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TULP4Q9NRJ4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
TULP4Q9NRJ4 AC009086.3-201ENST00000623486 1008 ntBASIC31.66■■■□□ 2.66
TULP4Q9NRJ4 ALDH1A3-203ENST00000557963 1670 ntBASIC31.66■■■□□ 2.66
TULP4Q9NRJ4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TULP4Q9NRJ4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TULP4Q9NRJ4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TULP4Q9NRJ4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TULP4Q9NRJ4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TULP4Q9NRJ4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TULP4Q9NRJ4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.65■■■□□ 2.66
TULP4Q9NRJ4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC31.64■■■□□ 2.66
TULP4Q9NRJ4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TULP4Q9NRJ4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TULP4Q9NRJ4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TULP4Q9NRJ4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TULP4Q9NRJ4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.64■■■□□ 2.66
TULP4Q9NRJ4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.64■■■□□ 2.66
TULP4Q9NRJ4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TULP4Q9NRJ4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
TULP4Q9NRJ4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
TULP4Q9NRJ4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
TULP4Q9NRJ4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TULP4Q9NRJ4 IRS3P-201ENST00000223076 1006 ntBASIC31.63■■■□□ 2.65
TULP4Q9NRJ4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TULP4Q9NRJ4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TULP4Q9NRJ4 AC138932.3-201ENST00000567634 1902 ntBASIC31.63■■■□□ 2.65
TULP4Q9NRJ4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TULP4Q9NRJ4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.62■■■□□ 2.65
TULP4Q9NRJ4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.62■■■□□ 2.65
TULP4Q9NRJ4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
TULP4Q9NRJ4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
TULP4Q9NRJ4 AP003733.4-201ENST00000623785 1697 ntBASIC31.62■■■□□ 2.65
TULP4Q9NRJ4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.61■■■□□ 2.65
TULP4Q9NRJ4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
TULP4Q9NRJ4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC31.61■■■□□ 2.65
TULP4Q9NRJ4 BX842568.3-201ENST00000418104 571 ntBASIC31.61■■■□□ 2.65
TULP4Q9NRJ4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TULP4Q9NRJ4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TULP4Q9NRJ4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TULP4Q9NRJ4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC31.6■■■□□ 2.65
TULP4Q9NRJ4 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.6■■■□□ 2.65
TULP4Q9NRJ4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
TULP4Q9NRJ4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
TULP4Q9NRJ4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
TULP4Q9NRJ4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC31.6■■■□□ 2.65
TULP4Q9NRJ4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC31.6■■■□□ 2.65
TULP4Q9NRJ4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms