Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.61■■□□□ 1.69
PDLIM7Q9NR12 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.61■■□□□ 1.69
PDLIM7Q9NR12 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDLIM7Q9NR12 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
PDLIM7Q9NR12 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.61■■□□□ 1.69
PDLIM7Q9NR12 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDLIM7Q9NR12 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.6■■□□□ 1.69
PDLIM7Q9NR12 AC099791.1-201ENST00000416440 715 ntBASIC25.6■■□□□ 1.69
PDLIM7Q9NR12 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PDLIM7Q9NR12 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.6■■□□□ 1.69
PDLIM7Q9NR12 IKBKGP1-201ENST00000612193 1073 ntBASIC25.6■■□□□ 1.69
PDLIM7Q9NR12 AC011298.3-201ENST00000615796 283 ntBASIC25.6■■□□□ 1.69
PDLIM7Q9NR12 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDLIM7Q9NR12 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDLIM7Q9NR12 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
PDLIM7Q9NR12 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDLIM7Q9NR12 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDLIM7Q9NR12 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.59■■□□□ 1.69
PDLIM7Q9NR12 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.59■■□□□ 1.69
PDLIM7Q9NR12 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.59■■□□□ 1.69
PDLIM7Q9NR12 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.59■■□□□ 1.69
PDLIM7Q9NR12 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.58■■□□□ 1.69
PDLIM7Q9NR12 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.58■■□□□ 1.69
PDLIM7Q9NR12 AC099791.2-201ENST00000605725 427 ntBASIC25.58■■□□□ 1.69
PDLIM7Q9NR12 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PDLIM7Q9NR12 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
PDLIM7Q9NR12 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 AL138724.1-201ENST00000606771 1088 ntBASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.57■■□□□ 1.68
PDLIM7Q9NR12 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDLIM7Q9NR12 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PDLIM7Q9NR12 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDLIM7Q9NR12 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.56■■□□□ 1.68
PDLIM7Q9NR12 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.56■■□□□ 1.68
PDLIM7Q9NR12 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PDLIM7Q9NR12 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
PDLIM7Q9NR12 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDLIM7Q9NR12 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.55■■□□□ 1.68
PDLIM7Q9NR12 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDLIM7Q9NR12 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDLIM7Q9NR12 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDLIM7Q9NR12 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDLIM7Q9NR12 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
PDLIM7Q9NR12 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDLIM7Q9NR12 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDLIM7Q9NR12 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 AC022517.1-201ENST00000592429 346 ntBASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PDLIM7Q9NR12 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDLIM7Q9NR12 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDLIM7Q9NR12 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDLIM7Q9NR12 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.53■■□□□ 1.68
PDLIM7Q9NR12 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDLIM7Q9NR12 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.53■■□□□ 1.68
PDLIM7Q9NR12 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDLIM7Q9NR12 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 AC034268.1-201ENST00000441047 882 ntBASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 AL022069.1-201ENST00000568025 1636 ntBASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.52■■□□□ 1.68
PDLIM7Q9NR12 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.51■■□□□ 1.68
PDLIM7Q9NR12 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDLIM7Q9NR12 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDLIM7Q9NR12 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.51■■□□□ 1.67
PDLIM7Q9NR12 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PDLIM7Q9NR12 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.51■■□□□ 1.67
PDLIM7Q9NR12 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms