Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
GPCPD1Q9NPB8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
GPCPD1Q9NPB8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
GPCPD1Q9NPB8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
GPCPD1Q9NPB8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.37■■□□□ 1.81
GPCPD1Q9NPB8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
GPCPD1Q9NPB8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.36■■□□□ 1.81
GPCPD1Q9NPB8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
GPCPD1Q9NPB8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
GPCPD1Q9NPB8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
GPCPD1Q9NPB8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
GPCPD1Q9NPB8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GPCPD1Q9NPB8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
GPCPD1Q9NPB8 LINC00543-201ENST00000567234 1845 ntBASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 PBX2P1-201ENST00000493219 1291 ntBASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 AC099791.2-201ENST00000605725 427 ntBASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
GPCPD1Q9NPB8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 C17orf82-201ENST00000623772 1530 ntBASIC26.34■■□□□ 1.81
GPCPD1Q9NPB8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GPCPD1Q9NPB8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GPCPD1Q9NPB8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GPCPD1Q9NPB8 AL136162.1-201ENST00000607711 1078 ntBASIC26.33■■□□□ 1.81
GPCPD1Q9NPB8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.33■■□□□ 1.81
GPCPD1Q9NPB8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
GPCPD1Q9NPB8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GPCPD1Q9NPB8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.33■■□□□ 1.8
GPCPD1Q9NPB8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
GPCPD1Q9NPB8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GPCPD1Q9NPB8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
GPCPD1Q9NPB8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
GPCPD1Q9NPB8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GPCPD1Q9NPB8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GPCPD1Q9NPB8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GPCPD1Q9NPB8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
GPCPD1Q9NPB8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
GPCPD1Q9NPB8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.31■■□□□ 1.8
GPCPD1Q9NPB8 AC004812.2-201ENST00000611079 2094 ntBASIC26.3■■□□□ 1.8
GPCPD1Q9NPB8 AC141586.4-201ENST00000624558 1573 ntBASIC26.3■■□□□ 1.8
GPCPD1Q9NPB8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
GPCPD1Q9NPB8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
GPCPD1Q9NPB8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
GPCPD1Q9NPB8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
GPCPD1Q9NPB8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
GPCPD1Q9NPB8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
GPCPD1Q9NPB8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.3■■□□□ 1.8
GPCPD1Q9NPB8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GPCPD1Q9NPB8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GPCPD1Q9NPB8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
GPCPD1Q9NPB8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
GPCPD1Q9NPB8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GPCPD1Q9NPB8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.29■■□□□ 1.8
GPCPD1Q9NPB8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GPCPD1Q9NPB8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 AC024257.2-201ENST00000549699 147 ntBASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 AC005837.3-201ENST00000612163 286 ntBASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 AC106739.1-201ENST00000617035 715 ntBASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
GPCPD1Q9NPB8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
GPCPD1Q9NPB8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
GPCPD1Q9NPB8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.27■■□□□ 1.8
GPCPD1Q9NPB8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms