Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD8Q9HCK8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.58■■□□□ 1.04
CHD8Q9HCK8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.58■■□□□ 1.04
CHD8Q9HCK8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.58■■□□□ 1.04
CHD8Q9HCK8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHD8Q9HCK8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD8Q9HCK8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD8Q9HCK8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD8Q9HCK8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.56■■□□□ 1.04
CHD8Q9HCK8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD8Q9HCK8 AL138781.1-201ENST00000566567 1274 ntBASIC21.56■■□□□ 1.04
CHD8Q9HCK8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD8Q9HCK8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.56■■□□□ 1.04
CHD8Q9HCK8 AC004854.2-201ENST00000608450 1441 ntBASIC21.56■■□□□ 1.04
CHD8Q9HCK8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD8Q9HCK8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD8Q9HCK8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD8Q9HCK8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.55■■□□□ 1.04
CHD8Q9HCK8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.55■■□□□ 1.04
CHD8Q9HCK8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHD8Q9HCK8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD8Q9HCK8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.54■■□□□ 1.04
CHD8Q9HCK8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.54■■□□□ 1.04
CHD8Q9HCK8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD8Q9HCK8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CHD8Q9HCK8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.53■■□□□ 1.04
CHD8Q9HCK8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.53■■□□□ 1.04
CHD8Q9HCK8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.53■■□□□ 1.04
CHD8Q9HCK8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD8Q9HCK8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD8Q9HCK8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD8Q9HCK8 LINC02228-203ENST00000641970 1355 ntBASIC21.52■■□□□ 1.04
CHD8Q9HCK8 AC083906.2-201ENST00000511578 360 ntBASIC21.52■■□□□ 1.04
CHD8Q9HCK8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.52■■□□□ 1.04
CHD8Q9HCK8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD8Q9HCK8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CHD8Q9HCK8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.52■■□□□ 1.04
CHD8Q9HCK8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD8Q9HCK8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD8Q9HCK8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.52■■□□□ 1.04
CHD8Q9HCK8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CHD8Q9HCK8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CHD8Q9HCK8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD8Q9HCK8 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 POU5F1P3-201ENST00000428824 1078 ntBASIC21.5■■□□□ 1.03
CHD8Q9HCK8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 AP004607.4-201ENST00000530158 1459 ntBASIC21.5■■□□□ 1.03
CHD8Q9HCK8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD8Q9HCK8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD8Q9HCK8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD8Q9HCK8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD8Q9HCK8 AC091060.1-201ENST00000623524 1766 ntBASIC21.49■■□□□ 1.03
CHD8Q9HCK8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD8Q9HCK8 AC098934.4-201ENST00000564127 592 ntBASIC21.48■■□□□ 1.03
CHD8Q9HCK8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD8Q9HCK8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD8Q9HCK8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.48■■□□□ 1.03
CHD8Q9HCK8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.48■■□□□ 1.03
CHD8Q9HCK8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD8Q9HCK8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD8Q9HCK8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.48■■□□□ 1.03
CHD8Q9HCK8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD8Q9HCK8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD8Q9HCK8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.48■■□□□ 1.03
CHD8Q9HCK8 SMUG1P1-201ENST00000590640 811 ntBASIC21.47■■□□□ 1.03
CHD8Q9HCK8 AL050303.2-201ENST00000619798 666 ntBASIC21.47■■□□□ 1.03
CHD8Q9HCK8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHD8Q9HCK8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD8Q9HCK8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.47■■□□□ 1.03
CHD8Q9HCK8 LINC01003-201ENST00000564834 1764 ntBASIC21.47■■□□□ 1.03
CHD8Q9HCK8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms