Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 C1orf229-201ENST00000623686 2258 ntBASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 AC016575.1-201ENST00000607026 382 ntBASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 GUSBP5-202ENST00000510805 1989 ntBASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.13■□□□□ 0.01
SND1-IT1Q9HBX3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 FOXO3B-201ENST00000395675 1928 ntBASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 AC137767.1-201ENST00000602918 1920 ntBASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 ANOS2P-203ENST00000472227 1816 ntBASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.12■□□□□ 0.01
SND1-IT1Q9HBX3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 RP9P-202ENST00000450133 1212 ntBASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SND1-IT1Q9HBX3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SND1-IT1Q9HBX3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 AC092296.2-201ENST00000589470 999 ntBASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.09■□□□□ 0.01
SND1-IT1Q9HBX3 DUSP8P3-201ENST00000399571 1760 ntBASIC15.08■□□□□ 0.01
SND1-IT1Q9HBX3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
SND1-IT1Q9HBX3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
SND1-IT1Q9HBX3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SND1-IT1Q9HBX3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SND1-IT1Q9HBX3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SND1-IT1Q9HBX3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 KRT18P10-201ENST00000388836 1287 ntBASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 ABHD17AP4-201ENST00000411545 909 ntBASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 AC093536.1-201ENST00000569153 554 ntBASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SND1-IT1Q9HBX3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms