Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RETREG1Q9H6L5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RETREG1Q9H6L5 AC009102.2-201ENST00000606772 1639 ntBASIC23.21■■□□□ 1.31
RETREG1Q9H6L5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.2■■□□□ 1.3
RETREG1Q9H6L5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RETREG1Q9H6L5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RETREG1Q9H6L5 AC093323.1-202ENST00000635031 2045 ntBASIC23.18■■□□□ 1.3
RETREG1Q9H6L5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RETREG1Q9H6L5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RETREG1Q9H6L5 FP325331.1-202ENST00000623531 1380 ntBASIC23.18■■□□□ 1.3
RETREG1Q9H6L5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.18■■□□□ 1.3
RETREG1Q9H6L5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RETREG1Q9H6L5 C17orf82-201ENST00000623772 1530 ntBASIC23.18■■□□□ 1.3
RETREG1Q9H6L5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RETREG1Q9H6L5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RETREG1Q9H6L5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.17■■□□□ 1.3
RETREG1Q9H6L5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.17■■□□□ 1.3
RETREG1Q9H6L5 AC131281.2-201ENST00000520478 145 ntBASIC23.17■■□□□ 1.3
RETREG1Q9H6L5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETREG1Q9H6L5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.17■■□□□ 1.3
RETREG1Q9H6L5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETREG1Q9H6L5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 AC241377.3-202ENST00000626088 1088 ntBASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 AC241585.3-202ENST00000628937 1088 ntBASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 AC245100.8-202ENST00000629247 1058 ntBASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RETREG1Q9H6L5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.14■■□□□ 1.3
RETREG1Q9H6L5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RETREG1Q9H6L5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 AC092171.4-201ENST00000609130 632 ntBASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 ABCB10P4-201ENST00000566803 2184 ntBASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RETREG1Q9H6L5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.13■■□□□ 1.29
RETREG1Q9H6L5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
RETREG1Q9H6L5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RETREG1Q9H6L5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RETREG1Q9H6L5 SRD5A1P1-201ENST00000442297 786 ntBASIC23.13■■□□□ 1.29
RETREG1Q9H6L5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.13■■□□□ 1.29
RETREG1Q9H6L5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.13■■□□□ 1.29
RETREG1Q9H6L5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.13■■□□□ 1.29
RETREG1Q9H6L5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RETREG1Q9H6L5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.12■■□□□ 1.29
RETREG1Q9H6L5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RETREG1Q9H6L5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.12■■□□□ 1.29
RETREG1Q9H6L5 MIR4466-201ENST00000606121 54 ntBASIC23.12■■□□□ 1.29
RETREG1Q9H6L5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RETREG1Q9H6L5 AC008406.3-201ENST00000620001 1374 ntBASIC23.12■■□□□ 1.29
RETREG1Q9H6L5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RETREG1Q9H6L5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RETREG1Q9H6L5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.12■■□□□ 1.29
RETREG1Q9H6L5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms