Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.54■□□□□ 0.24
MAP1LC3AQ9H492 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MAP1LC3AQ9H492 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MAP1LC3AQ9H492 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MAP1LC3AQ9H492 AC007375.3-201ENST00000600936 2314 ntBASIC16.52■□□□□ 0.24
MAP1LC3AQ9H492 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MAP1LC3AQ9H492 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
MAP1LC3AQ9H492 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MAP1LC3AQ9H492 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MAP1LC3AQ9H492 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.52■□□□□ 0.24
MAP1LC3AQ9H492 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MAP1LC3AQ9H492 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MAP1LC3AQ9H492 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MAP1LC3AQ9H492 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.52■□□□□ 0.23
MAP1LC3AQ9H492 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MAP1LC3AQ9H492 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MAP1LC3AQ9H492 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MAP1LC3AQ9H492 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MAP1LC3AQ9H492 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 AC242852.2-201ENST00000615738 1807 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 DUX4L13-201ENST00000554103 1267 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 DUX4L15-201ENST00000611059 1267 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 DUX4L23-201ENST00000615195 1269 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 DUX4L24-201ENST00000617576 1269 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 DUX4L22-201ENST00000618238 1269 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 DUX4L20-201ENST00000619712 1269 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 DUX4L21-201ENST00000622058 1269 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 DUX4L10-201ENST00000622460 1267 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 DUX4L25-201ENST00000624915 1269 ntBASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MAP1LC3AQ9H492 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms