Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SPTBN4Q9H254 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SPTBN4Q9H254 AC004854.2-201ENST00000608450 1441 ntBASIC22.15■■□□□ 1.14
SPTBN4Q9H254 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SPTBN4Q9H254 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.14■■□□□ 1.14
SPTBN4Q9H254 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.14
SPTBN4Q9H254 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPTBN4Q9H254 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SPTBN4Q9H254 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.14■■□□□ 1.13
SPTBN4Q9H254 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SPTBN4Q9H254 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPTBN4Q9H254 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SPTBN4Q9H254 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SPTBN4Q9H254 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SPTBN4Q9H254 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPTBN4Q9H254 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.12■■□□□ 1.13
SPTBN4Q9H254 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SPTBN4Q9H254 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SPTBN4Q9H254 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.12■■□□□ 1.13
SPTBN4Q9H254 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.12■■□□□ 1.13
SPTBN4Q9H254 AL050303.2-201ENST00000619798 666 ntBASIC22.12■■□□□ 1.13
SPTBN4Q9H254 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 SLC29A4P1-201ENST00000398760 971 ntBASIC22.11■■□□□ 1.13
SPTBN4Q9H254 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 AC098934.4-201ENST00000564127 592 ntBASIC22.11■■□□□ 1.13
SPTBN4Q9H254 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPTBN4Q9H254 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPTBN4Q9H254 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SPTBN4Q9H254 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.1■■□□□ 1.13
SPTBN4Q9H254 AC098590.1-201ENST00000468126 897 ntBASIC22.1■■□□□ 1.13
SPTBN4Q9H254 TPRG1LP1-201ENST00000598702 760 ntBASIC22.1■■□□□ 1.13
SPTBN4Q9H254 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SPTBN4Q9H254 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPTBN4Q9H254 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.1■■□□□ 1.13
SPTBN4Q9H254 GCSHP5-201ENST00000443090 522 ntBASIC22.1■■□□□ 1.13
SPTBN4Q9H254 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.1■■□□□ 1.13
SPTBN4Q9H254 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPTBN4Q9H254 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPTBN4Q9H254 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
SPTBN4Q9H254 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SPTBN4Q9H254 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SPTBN4Q9H254 KRT18P29-201ENST00000397031 1267 ntBASIC22.09■■□□□ 1.13
SPTBN4Q9H254 AL596275.1-201ENST00000423464 877 ntBASIC22.09■■□□□ 1.13
SPTBN4Q9H254 SLC7A5P2-201ENST00000553010 536 ntBASIC22.09■■□□□ 1.13
SPTBN4Q9H254 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SPTBN4Q9H254 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.09■■□□□ 1.13
SPTBN4Q9H254 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.09■■□□□ 1.13
SPTBN4Q9H254 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
SPTBN4Q9H254 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SPTBN4Q9H254 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.08■■□□□ 1.13
SPTBN4Q9H254 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.08■■□□□ 1.13
SPTBN4Q9H254 AC091060.1-201ENST00000623524 1766 ntBASIC22.08■■□□□ 1.13
SPTBN4Q9H254 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
SPTBN4Q9H254 LINC02228-203ENST00000641970 1355 ntBASIC22.08■■□□□ 1.13
SPTBN4Q9H254 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.08■■□□□ 1.12
SPTBN4Q9H254 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.12
SPTBN4Q9H254 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.07■■□□□ 1.12
SPTBN4Q9H254 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.06■■□□□ 1.12
SPTBN4Q9H254 MFSD11-216ENST00000590393 1141 ntBASIC22.06■■□□□ 1.12
SPTBN4Q9H254 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SPTBN4Q9H254 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPTBN4Q9H254 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPTBN4Q9H254 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPTBN4Q9H254 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SPTBN4Q9H254 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPTBN4Q9H254 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.05■■□□□ 1.12
SPTBN4Q9H254 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPTBN4Q9H254 TSPY6P-201ENST00000448518 926 ntBASIC22.04■■□□□ 1.12
SPTBN4Q9H254 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.04■■□□□ 1.12
SPTBN4Q9H254 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SPTBN4Q9H254 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms