Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NUCKS1Q9H1E3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NUCKS1Q9H1E3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NUCKS1Q9H1E3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.56■■□□□ 1.52
NUCKS1Q9H1E3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NUCKS1Q9H1E3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NUCKS1Q9H1E3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NUCKS1Q9H1E3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
NUCKS1Q9H1E3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.55■■□□□ 1.52
NUCKS1Q9H1E3 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.55■■□□□ 1.52
NUCKS1Q9H1E3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NUCKS1Q9H1E3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.55■■□□□ 1.52
NUCKS1Q9H1E3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.54■■□□□ 1.52
NUCKS1Q9H1E3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.54■■□□□ 1.52
NUCKS1Q9H1E3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NUCKS1Q9H1E3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
NUCKS1Q9H1E3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.54■■□□□ 1.52
NUCKS1Q9H1E3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.54■■□□□ 1.52
NUCKS1Q9H1E3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NUCKS1Q9H1E3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.53■■□□□ 1.52
NUCKS1Q9H1E3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
NUCKS1Q9H1E3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NUCKS1Q9H1E3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
NUCKS1Q9H1E3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NUCKS1Q9H1E3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 AC103724.3-201ENST00000564481 992 ntBASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NUCKS1Q9H1E3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.52■■□□□ 1.51
NUCKS1Q9H1E3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NUCKS1Q9H1E3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NUCKS1Q9H1E3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NUCKS1Q9H1E3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NUCKS1Q9H1E3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NUCKS1Q9H1E3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.5■■□□□ 1.51
NUCKS1Q9H1E3 AL451085.2-201ENST00000605085 799 ntBASIC24.5■■□□□ 1.51
NUCKS1Q9H1E3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.5■■□□□ 1.51
NUCKS1Q9H1E3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
NUCKS1Q9H1E3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NUCKS1Q9H1E3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NUCKS1Q9H1E3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NUCKS1Q9H1E3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NUCKS1Q9H1E3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
NUCKS1Q9H1E3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.48■■□□□ 1.51
NUCKS1Q9H1E3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.48■■□□□ 1.51
NUCKS1Q9H1E3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NUCKS1Q9H1E3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
NUCKS1Q9H1E3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NUCKS1Q9H1E3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
NUCKS1Q9H1E3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 AL117328.2-201ENST00000624617 1940 ntBASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms