Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSBP3Q9BWW4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSBP3Q9BWW4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSBP3Q9BWW4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSBP3Q9BWW4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.86■□□□□ 0.61
SSBP3Q9BWW4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSBP3Q9BWW4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.86■□□□□ 0.61
SSBP3Q9BWW4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.86■□□□□ 0.61
SSBP3Q9BWW4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSBP3Q9BWW4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.86■□□□□ 0.61
SSBP3Q9BWW4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.86■□□□□ 0.61
SSBP3Q9BWW4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSBP3Q9BWW4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSBP3Q9BWW4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.85■□□□□ 0.61
SSBP3Q9BWW4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSBP3Q9BWW4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.85■□□□□ 0.61
SSBP3Q9BWW4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.85■□□□□ 0.61
SSBP3Q9BWW4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSBP3Q9BWW4 AL139246.5-201ENST00000606645 996 ntBASIC18.85■□□□□ 0.61
SSBP3Q9BWW4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.84■□□□□ 0.61
SSBP3Q9BWW4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSBP3Q9BWW4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSBP3Q9BWW4 AC096631.2-201ENST00000436136 790 ntBASIC18.84■□□□□ 0.61
SSBP3Q9BWW4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.84■□□□□ 0.61
SSBP3Q9BWW4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSBP3Q9BWW4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSBP3Q9BWW4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSBP3Q9BWW4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSBP3Q9BWW4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSBP3Q9BWW4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSBP3Q9BWW4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
SSBP3Q9BWW4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSBP3Q9BWW4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSBP3Q9BWW4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSBP3Q9BWW4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.83■□□□□ 0.6
SSBP3Q9BWW4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SSBP3Q9BWW4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSBP3Q9BWW4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSBP3Q9BWW4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 AC009102.2-201ENST00000606772 1639 ntBASIC18.82■□□□□ 0.6
SSBP3Q9BWW4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 AC092171.4-201ENST00000609130 632 ntBASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.81■□□□□ 0.6
SSBP3Q9BWW4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 AC110285.6-201ENST00000617652 491 ntBASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 AC141586.4-201ENST00000624558 1573 ntBASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSBP3Q9BWW4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms