Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
FOXC2Q99958 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FOXC2Q99958 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXC2Q99958 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXC2Q99958 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXC2Q99958 TERF1P2-201ENST00000583350 1212 ntBASIC19.18■□□□□ 0.66
FOXC2Q99958 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FOXC2Q99958 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
FOXC2Q99958 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXC2Q99958 LINC02228-203ENST00000641970 1355 ntBASIC19.18■□□□□ 0.66
FOXC2Q99958 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXC2Q99958 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FOXC2Q99958 ESRRAP2-201ENST00000418437 1549 ntBASIC19.17■□□□□ 0.66
FOXC2Q99958 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXC2Q99958 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXC2Q99958 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FOXC2Q99958 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXC2Q99958 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXC2Q99958 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXC2Q99958 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
FOXC2Q99958 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXC2Q99958 ABHD17AP1-201ENST00000358206 933 ntBASIC19.16■□□□□ 0.66
FOXC2Q99958 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXC2Q99958 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXC2Q99958 pRNA.6-201ENST00000610482 90 ntBASIC19.16■□□□□ 0.66
FOXC2Q99958 AC080038.1-201ENST00000611274 1154 ntBASIC19.16■□□□□ 0.66
FOXC2Q99958 pRNA.5-201ENST00000612139 90 ntBASIC19.16■□□□□ 0.66
FOXC2Q99958 pRNA.11-201ENST00000618423 90 ntBASIC19.16■□□□□ 0.66
FOXC2Q99958 pRNA.13-201ENST00000619112 90 ntBASIC19.16■□□□□ 0.66
FOXC2Q99958 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
FOXC2Q99958 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXC2Q99958 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXC2Q99958 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXC2Q99958 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXC2Q99958 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXC2Q99958 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
FOXC2Q99958 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXC2Q99958 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FOXC2Q99958 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXC2Q99958 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXC2Q99958 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
FOXC2Q99958 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXC2Q99958 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
FOXC2Q99958 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXC2Q99958 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
FOXC2Q99958 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXC2Q99958 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXC2Q99958 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXC2Q99958 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.14■□□□□ 0.65
FOXC2Q99958 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXC2Q99958 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXC2Q99958 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXC2Q99958 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXC2Q99958 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXC2Q99958 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXC2Q99958 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXC2Q99958 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXC2Q99958 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
FOXC2Q99958 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
FOXC2Q99958 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXC2Q99958 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXC2Q99958 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FOXC2Q99958 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXC2Q99958 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXC2Q99958 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXC2Q99958 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXC2Q99958 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXC2Q99958 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FOXC2Q99958 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXC2Q99958 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXC2Q99958 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXC2Q99958 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.12■□□□□ 0.65
FOXC2Q99958 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXC2Q99958 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.12■□□□□ 0.65
FOXC2Q99958 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXC2Q99958 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXC2Q99958 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXC2Q99958 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FOXC2Q99958 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
FOXC2Q99958 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXC2Q99958 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXC2Q99958 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXC2Q99958 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXC2Q99958 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXC2Q99958 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXC2Q99958 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXC2Q99958 TMEM191A-211ENST00000637163 1067 ntBASIC19.11■□□□□ 0.65
FOXC2Q99958 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXC2Q99958 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FOXC2Q99958 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
FOXC2Q99958 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms