Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.67■□□□□ 0.9
NPAS1Q99742 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS1Q99742 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS1Q99742 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS1Q99742 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.66■□□□□ 0.9
NPAS1Q99742 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NPAS1Q99742 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.66■□□□□ 0.9
NPAS1Q99742 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS1Q99742 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
NPAS1Q99742 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS1Q99742 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NPAS1Q99742 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS1Q99742 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS1Q99742 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NPAS1Q99742 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS1Q99742 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS1Q99742 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS1Q99742 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS1Q99742 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS1Q99742 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.64■□□□□ 0.9
NPAS1Q99742 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NPAS1Q99742 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NPAS1Q99742 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.64■□□□□ 0.89
NPAS1Q99742 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NPAS1Q99742 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.64■□□□□ 0.89
NPAS1Q99742 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NPAS1Q99742 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS1Q99742 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS1Q99742 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS1Q99742 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.64■□□□□ 0.89
NPAS1Q99742 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS1Q99742 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS1Q99742 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NPAS1Q99742 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
NPAS1Q99742 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS1Q99742 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NPAS1Q99742 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NPAS1Q99742 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS1Q99742 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS1Q99742 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS1Q99742 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
NPAS1Q99742 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.62■□□□□ 0.89
NPAS1Q99742 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS1Q99742 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NPAS1Q99742 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NPAS1Q99742 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS1Q99742 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.62■□□□□ 0.89
NPAS1Q99742 MIR6724-1-201ENST00000616420 92 ntBASIC20.62■□□□□ 0.89
NPAS1Q99742 MIR6724-2-201ENST00000616483 92 ntBASIC20.62■□□□□ 0.89
NPAS1Q99742 MIR6724-4-201ENST00000617390 92 ntBASIC20.62■□□□□ 0.89
NPAS1Q99742 MIR6724-3-201ENST00000622482 92 ntBASIC20.62■□□□□ 0.89
NPAS1Q99742 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS1Q99742 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.62■□□□□ 0.89
NPAS1Q99742 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.62■□□□□ 0.89
NPAS1Q99742 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS1Q99742 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NPAS1Q99742 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS1Q99742 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NPAS1Q99742 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.61■□□□□ 0.89
NPAS1Q99742 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS1Q99742 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS1Q99742 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS1Q99742 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS1Q99742 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS1Q99742 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS1Q99742 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS1Q99742 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NPAS1Q99742 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.6■□□□□ 0.89
NPAS1Q99742 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS1Q99742 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS1Q99742 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS1Q99742 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS1Q99742 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS1Q99742 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.6■□□□□ 0.89
NPAS1Q99742 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS1Q99742 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.6■□□□□ 0.89
NPAS1Q99742 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS1Q99742 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS1Q99742 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS1Q99742 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NPAS1Q99742 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NPAS1Q99742 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.59■□□□□ 0.89
NPAS1Q99742 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS1Q99742 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS1Q99742 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS1Q99742 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NPAS1Q99742 AC133561.1-201ENST00000568600 2415 ntBASIC20.59■□□□□ 0.89
NPAS1Q99742 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS1Q99742 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
NPAS1Q99742 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms