Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
BARD1Q99728 MIR4281-201ENST00000580852 62 ntBASIC21.6■■□□□ 1.05
BARD1Q99728 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BARD1Q99728 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BARD1Q99728 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BARD1Q99728 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BARD1Q99728 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
BARD1Q99728 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.59■■□□□ 1.05
BARD1Q99728 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.59■■□□□ 1.05
BARD1Q99728 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.59■■□□□ 1.05
BARD1Q99728 MIR3621-201ENST00000580529 85 ntBASIC21.59■■□□□ 1.05
BARD1Q99728 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.59■■□□□ 1.05
BARD1Q99728 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BARD1Q99728 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.59■■□□□ 1.05
BARD1Q99728 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BARD1Q99728 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BARD1Q99728 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
BARD1Q99728 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BARD1Q99728 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
BARD1Q99728 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BARD1Q99728 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
BARD1Q99728 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
BARD1Q99728 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.58■■□□□ 1.05
BARD1Q99728 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.58■■□□□ 1.05
BARD1Q99728 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BARD1Q99728 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BARD1Q99728 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.58■■□□□ 1.05
BARD1Q99728 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.58■■□□□ 1.05
BARD1Q99728 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.58■■□□□ 1.05
BARD1Q99728 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
BARD1Q99728 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BARD1Q99728 HLA-L-211ENST00000482052 1765 ntBASIC21.58■■□□□ 1.04
BARD1Q99728 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BARD1Q99728 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.57■■□□□ 1.04
BARD1Q99728 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.57■■□□□ 1.04
BARD1Q99728 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.57■■□□□ 1.04
BARD1Q99728 AL117332.1-201ENST00000622628 974 ntBASIC21.57■■□□□ 1.04
BARD1Q99728 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BARD1Q99728 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
BARD1Q99728 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BARD1Q99728 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BARD1Q99728 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BARD1Q99728 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
BARD1Q99728 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
BARD1Q99728 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.56■■□□□ 1.04
BARD1Q99728 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BARD1Q99728 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.56■■□□□ 1.04
BARD1Q99728 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
BARD1Q99728 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
BARD1Q99728 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
BARD1Q99728 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
BARD1Q99728 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BARD1Q99728 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
BARD1Q99728 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BARD1Q99728 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.55■■□□□ 1.04
BARD1Q99728 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BARD1Q99728 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BARD1Q99728 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.55■■□□□ 1.04
BARD1Q99728 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BARD1Q99728 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BARD1Q99728 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
BARD1Q99728 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
BARD1Q99728 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.55■■□□□ 1.04
BARD1Q99728 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BARD1Q99728 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.55■■□□□ 1.04
BARD1Q99728 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BARD1Q99728 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BARD1Q99728 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.55■■□□□ 1.04
BARD1Q99728 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.54■■□□□ 1.04
BARD1Q99728 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.54■■□□□ 1.04
BARD1Q99728 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 AL136116.3-201ENST00000402907 1138 ntBASIC21.54■■□□□ 1.04
BARD1Q99728 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 AC010997.5-201ENST00000609182 354 ntBASIC21.54■■□□□ 1.04
BARD1Q99728 MIR6724-1-201ENST00000616420 92 ntBASIC21.54■■□□□ 1.04
BARD1Q99728 MIR6724-2-201ENST00000616483 92 ntBASIC21.54■■□□□ 1.04
BARD1Q99728 MIR6724-4-201ENST00000617390 92 ntBASIC21.54■■□□□ 1.04
BARD1Q99728 MIR6724-3-201ENST00000622482 92 ntBASIC21.54■■□□□ 1.04
BARD1Q99728 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
BARD1Q99728 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
BARD1Q99728 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
BARD1Q99728 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
BARD1Q99728 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
BARD1Q99728 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BARD1Q99728 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BARD1Q99728 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
BARD1Q99728 AC011551.1-201ENST00000614101 683 ntBASIC21.53■■□□□ 1.04
BARD1Q99728 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BARD1Q99728 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BARD1Q99728 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
BARD1Q99728 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
BARD1Q99728 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BARD1Q99728 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 680.9 ms