Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV9Q99603 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.68■□□□□ 0.42
TRGV9Q99603 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV9Q99603 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRGV9Q99603 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRGV9Q99603 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV9Q99603 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRGV9Q99603 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV9Q99603 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.67■□□□□ 0.42
TRGV9Q99603 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV9Q99603 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TRGV9Q99603 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 KRT18P60-201ENST00000312876 1297 ntBASIC17.66■□□□□ 0.42
TRGV9Q99603 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.66■□□□□ 0.42
TRGV9Q99603 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.66■□□□□ 0.42
TRGV9Q99603 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRGV9Q99603 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRGV9Q99603 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV9Q99603 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRGV9Q99603 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV9Q99603 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.65■□□□□ 0.42
TRGV9Q99603 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV9Q99603 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.65■□□□□ 0.42
TRGV9Q99603 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV9Q99603 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRGV9Q99603 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TRGV9Q99603 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV9Q99603 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV9Q99603 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV9Q99603 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV9Q99603 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.65■□□□□ 0.42
TRGV9Q99603 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV9Q99603 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRGV9Q99603 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV9Q99603 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.64■□□□□ 0.41
TRGV9Q99603 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.64■□□□□ 0.41
TRGV9Q99603 AC139795.1-202ENST00000500444 432 ntBASIC17.64■□□□□ 0.41
TRGV9Q99603 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV9Q99603 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV9Q99603 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV9Q99603 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV9Q99603 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV9Q99603 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV9Q99603 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.64■□□□□ 0.41
TRGV9Q99603 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV9Q99603 C1orf229-201ENST00000623686 2258 ntBASIC17.63■□□□□ 0.41
TRGV9Q99603 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV9Q99603 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.63■□□□□ 0.41
TRGV9Q99603 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV9Q99603 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV9Q99603 HSD17B1P1-201ENST00000590052 955 ntBASIC17.63■□□□□ 0.41
TRGV9Q99603 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV9Q99603 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV9Q99603 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV9Q99603 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.63■□□□□ 0.41
TRGV9Q99603 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV9Q99603 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV9Q99603 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV9Q99603 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV9Q99603 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV9Q99603 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV9Q99603 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV9Q99603 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV9Q99603 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV9Q99603 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.61■□□□□ 0.41
TRGV9Q99603 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.61■□□□□ 0.41
TRGV9Q99603 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.61■□□□□ 0.41
TRGV9Q99603 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.61■□□□□ 0.41
TRGV9Q99603 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV9Q99603 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRGV9Q99603 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.61■□□□□ 0.41
TRGV9Q99603 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.6■□□□□ 0.41
TRGV9Q99603 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.6■□□□□ 0.41
TRGV9Q99603 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms