Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.64■□□□□ 0.57
S1PR3Q99500 RARRES2P1-201ENST00000474487 481 ntBASIC18.64■□□□□ 0.57
S1PR3Q99500 AC103724.3-201ENST00000564481 992 ntBASIC18.64■□□□□ 0.57
S1PR3Q99500 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
S1PR3Q99500 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
S1PR3Q99500 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
S1PR3Q99500 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
S1PR3Q99500 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
S1PR3Q99500 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
S1PR3Q99500 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
S1PR3Q99500 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
S1PR3Q99500 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
S1PR3Q99500 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.63■□□□□ 0.57
S1PR3Q99500 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
S1PR3Q99500 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.63■□□□□ 0.57
S1PR3Q99500 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.63■□□□□ 0.57
S1PR3Q99500 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
S1PR3Q99500 AC133561.1-201ENST00000568600 2415 ntBASIC18.63■□□□□ 0.57
S1PR3Q99500 AC131274.2-201ENST00000580697 1507 ntBASIC18.63■□□□□ 0.57
S1PR3Q99500 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
S1PR3Q99500 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.63■□□□□ 0.57
S1PR3Q99500 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
S1PR3Q99500 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
S1PR3Q99500 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
S1PR3Q99500 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.62■□□□□ 0.57
S1PR3Q99500 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.62■□□□□ 0.57
S1PR3Q99500 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
S1PR3Q99500 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
S1PR3Q99500 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
S1PR3Q99500 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
S1PR3Q99500 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
S1PR3Q99500 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
S1PR3Q99500 AC068473.5-201ENST00000616428 2072 ntBASIC18.62■□□□□ 0.57
S1PR3Q99500 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
S1PR3Q99500 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.61■□□□□ 0.57
S1PR3Q99500 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
S1PR3Q99500 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
S1PR3Q99500 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.61■□□□□ 0.57
S1PR3Q99500 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
S1PR3Q99500 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
S1PR3Q99500 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
S1PR3Q99500 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.61■□□□□ 0.57
S1PR3Q99500 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
S1PR3Q99500 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
S1PR3Q99500 AL031848.2-201ENST00000607670 837 ntBASIC18.61■□□□□ 0.57
S1PR3Q99500 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
S1PR3Q99500 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.61■□□□□ 0.57
S1PR3Q99500 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
S1PR3Q99500 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.61■□□□□ 0.57
S1PR3Q99500 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.6■□□□□ 0.57
S1PR3Q99500 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
S1PR3Q99500 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
S1PR3Q99500 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
S1PR3Q99500 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
S1PR3Q99500 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
S1PR3Q99500 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
S1PR3Q99500 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
S1PR3Q99500 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
S1PR3Q99500 ALDH1A3-203ENST00000557963 1670 ntBASIC18.6■□□□□ 0.57
S1PR3Q99500 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
S1PR3Q99500 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
S1PR3Q99500 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
S1PR3Q99500 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
S1PR3Q99500 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
S1PR3Q99500 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
S1PR3Q99500 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.58■□□□□ 0.57
S1PR3Q99500 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
S1PR3Q99500 AF131216.4-201ENST00000638924 1588 ntBASIC18.58■□□□□ 0.56
S1PR3Q99500 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
S1PR3Q99500 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
S1PR3Q99500 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
S1PR3Q99500 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
S1PR3Q99500 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
S1PR3Q99500 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
S1PR3Q99500 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.58■□□□□ 0.56
S1PR3Q99500 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
S1PR3Q99500 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.57■□□□□ 0.56
S1PR3Q99500 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
S1PR3Q99500 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
S1PR3Q99500 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.57■□□□□ 0.56
S1PR3Q99500 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.57■□□□□ 0.56
S1PR3Q99500 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.57■□□□□ 0.56
S1PR3Q99500 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
S1PR3Q99500 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
S1PR3Q99500 PKD1P6-201ENST00000343738 4769 ntBASIC18.57■□□□□ 0.56
S1PR3Q99500 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
S1PR3Q99500 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
S1PR3Q99500 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.57■□□□□ 0.56
S1PR3Q99500 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.57■□□□□ 0.56
S1PR3Q99500 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
S1PR3Q99500 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms