Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NEK1Q96PY6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
NEK1Q96PY6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NEK1Q96PY6 DUSP8P5-201ENST00000422884 1815 ntBASIC26.9■■□□□ 1.9
NEK1Q96PY6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NEK1Q96PY6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NEK1Q96PY6 AC092028.1-203ENST00000608262 953 ntBASIC26.9■■□□□ 1.9
NEK1Q96PY6 ANOS2P-203ENST00000472227 1816 ntBASIC26.9■■□□□ 1.9
NEK1Q96PY6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NEK1Q96PY6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NEK1Q96PY6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
NEK1Q96PY6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NEK1Q96PY6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NEK1Q96PY6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.89■■□□□ 1.9
NEK1Q96PY6 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.89■■□□□ 1.9
NEK1Q96PY6 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.89■■□□□ 1.9
NEK1Q96PY6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
NEK1Q96PY6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.89■■□□□ 1.9
NEK1Q96PY6 MIR4787-201ENST00000607364 84 ntBASIC26.89■■□□□ 1.9
NEK1Q96PY6 MIR6722-201ENST00000617286 78 ntBASIC26.89■■□□□ 1.9
NEK1Q96PY6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
NEK1Q96PY6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NEK1Q96PY6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NEK1Q96PY6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
NEK1Q96PY6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
NEK1Q96PY6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.88■■□□□ 1.89
NEK1Q96PY6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.88■■□□□ 1.89
NEK1Q96PY6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.88■■□□□ 1.89
NEK1Q96PY6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NEK1Q96PY6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NEK1Q96PY6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.88■■□□□ 1.89
NEK1Q96PY6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
NEK1Q96PY6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.87■■□□□ 1.89
NEK1Q96PY6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.87■■□□□ 1.89
NEK1Q96PY6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
NEK1Q96PY6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
NEK1Q96PY6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NEK1Q96PY6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NEK1Q96PY6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NEK1Q96PY6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.87■■□□□ 1.89
NEK1Q96PY6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NEK1Q96PY6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
NEK1Q96PY6 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.86■■□□□ 1.89
NEK1Q96PY6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NEK1Q96PY6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
NEK1Q96PY6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
NEK1Q96PY6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
NEK1Q96PY6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
NEK1Q96PY6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.86■■□□□ 1.89
NEK1Q96PY6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
NEK1Q96PY6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NEK1Q96PY6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
NEK1Q96PY6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
NEK1Q96PY6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
NEK1Q96PY6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
NEK1Q96PY6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.85■■□□□ 1.89
NEK1Q96PY6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.85■■□□□ 1.89
NEK1Q96PY6 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.85■■□□□ 1.89
NEK1Q96PY6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NEK1Q96PY6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
NEK1Q96PY6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.84■■□□□ 1.89
NEK1Q96PY6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
NEK1Q96PY6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NEK1Q96PY6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.84■■□□□ 1.89
NEK1Q96PY6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
NEK1Q96PY6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NEK1Q96PY6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
NEK1Q96PY6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
NEK1Q96PY6 AC092068.2-201ENST00000590491 1708 ntBASIC26.83■■□□□ 1.89
NEK1Q96PY6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NEK1Q96PY6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.83■■□□□ 1.89
NEK1Q96PY6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
NEK1Q96PY6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NEK1Q96PY6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
NEK1Q96PY6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
NEK1Q96PY6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NEK1Q96PY6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.82■■□□□ 1.88
NEK1Q96PY6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NEK1Q96PY6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NEK1Q96PY6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NEK1Q96PY6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NEK1Q96PY6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NEK1Q96PY6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NEK1Q96PY6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.81■■□□□ 1.88
NEK1Q96PY6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NEK1Q96PY6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
NEK1Q96PY6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NEK1Q96PY6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.81■■□□□ 1.88
NEK1Q96PY6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
NEK1Q96PY6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
NEK1Q96PY6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NEK1Q96PY6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
NEK1Q96PY6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
NEK1Q96PY6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NEK1Q96PY6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
NEK1Q96PY6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.8■■□□□ 1.88
NEK1Q96PY6 AL035685.1-201ENST00000636663 812 ntBASIC26.8■■□□□ 1.88
NEK1Q96PY6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NEK1Q96PY6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NEK1Q96PY6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms