Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DUX3Q96PT4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DUX3Q96PT4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
DUX3Q96PT4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DUX3Q96PT4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
DUX3Q96PT4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
DUX3Q96PT4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DUX3Q96PT4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
DUX3Q96PT4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DUX3Q96PT4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.58■□□□□ 0.4
DUX3Q96PT4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DUX3Q96PT4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.58■□□□□ 0.4
DUX3Q96PT4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DUX3Q96PT4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DUX3Q96PT4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DUX3Q96PT4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX3Q96PT4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
DUX3Q96PT4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX3Q96PT4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX3Q96PT4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.57■□□□□ 0.4
DUX3Q96PT4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX3Q96PT4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
DUX3Q96PT4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX3Q96PT4 MIR935-201ENST00000401179 91 ntBASIC17.56■□□□□ 0.4
DUX3Q96PT4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.56■□□□□ 0.4
DUX3Q96PT4 AC005837.3-201ENST00000612163 286 ntBASIC17.56■□□□□ 0.4
DUX3Q96PT4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.56■□□□□ 0.4
DUX3Q96PT4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DUX3Q96PT4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.56■□□□□ 0.4
DUX3Q96PT4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX3Q96PT4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DUX3Q96PT4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
DUX3Q96PT4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DUX3Q96PT4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.55■□□□□ 0.4
DUX3Q96PT4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.55■□□□□ 0.4
DUX3Q96PT4 AL136162.1-201ENST00000607711 1078 ntBASIC17.55■□□□□ 0.4
DUX3Q96PT4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX3Q96PT4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX3Q96PT4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX3Q96PT4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.54■□□□□ 0.4
DUX3Q96PT4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX3Q96PT4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX3Q96PT4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX3Q96PT4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DUX3Q96PT4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DUX3Q96PT4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DUX3Q96PT4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX3Q96PT4 AC142381.3-201ENST00000568208 1670 ntBASIC17.54■□□□□ 0.4
DUX3Q96PT4 AP003733.4-201ENST00000623785 1697 ntBASIC17.54■□□□□ 0.4
DUX3Q96PT4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX3Q96PT4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX3Q96PT4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX3Q96PT4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX3Q96PT4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX3Q96PT4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX3Q96PT4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.53■□□□□ 0.4
DUX3Q96PT4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX3Q96PT4 AC009102.2-201ENST00000606772 1639 ntBASIC17.53■□□□□ 0.4
DUX3Q96PT4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX3Q96PT4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
DUX3Q96PT4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
DUX3Q96PT4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX3Q96PT4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX3Q96PT4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.52■□□□□ 0.4
DUX3Q96PT4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.52■□□□□ 0.4
DUX3Q96PT4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DUX3Q96PT4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.52■□□□□ 0.4
DUX3Q96PT4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DUX3Q96PT4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DUX3Q96PT4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DUX3Q96PT4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DUX3Q96PT4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.52■□□□□ 0.4
DUX3Q96PT4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.52■□□□□ 0.39
DUX3Q96PT4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DUX3Q96PT4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
DUX3Q96PT4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.51■□□□□ 0.39
DUX3Q96PT4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 AC024257.2-201ENST00000549699 147 ntBASIC17.51■□□□□ 0.39
DUX3Q96PT4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.51■□□□□ 0.39
DUX3Q96PT4 AC099791.2-201ENST00000605725 427 ntBASIC17.51■□□□□ 0.39
DUX3Q96PT4 AC106739.1-201ENST00000617035 715 ntBASIC17.51■□□□□ 0.39
DUX3Q96PT4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DUX3Q96PT4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX3Q96PT4 AC135279.3-201ENST00000610945 1311 ntBASIC17.5■□□□□ 0.39
DUX3Q96PT4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DUX3Q96PT4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUX3Q96PT4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DUX3Q96PT4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUX3Q96PT4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
DUX3Q96PT4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.5■□□□□ 0.39
DUX3Q96PT4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
DUX3Q96PT4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms