Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MRPL53Q96EL3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPL53Q96EL3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MRPL53Q96EL3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPL53Q96EL3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.02■□□□□ 0.32
MRPL53Q96EL3 ABHD17AP5-201ENST00000580133 923 ntBASIC17.02■□□□□ 0.32
MRPL53Q96EL3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRPL53Q96EL3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.02■□□□□ 0.31
MRPL53Q96EL3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 AC120024.1-201ENST00000562672 995 ntBASIC17.01■□□□□ 0.31
MRPL53Q96EL3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.01■□□□□ 0.31
MRPL53Q96EL3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17■□□□□ 0.31
MRPL53Q96EL3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17■□□□□ 0.31
MRPL53Q96EL3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17■□□□□ 0.31
MRPL53Q96EL3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRPL53Q96EL3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17■□□□□ 0.31
MRPL53Q96EL3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRPL53Q96EL3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MRPL53Q96EL3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17■□□□□ 0.31
MRPL53Q96EL3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17■□□□□ 0.31
MRPL53Q96EL3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRPL53Q96EL3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MRPL53Q96EL3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 AC233723.2-201ENST00000623798 2106 ntBASIC16.99■□□□□ 0.31
MRPL53Q96EL3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 KRT18P24-201ENST00000344739 1156 ntBASIC16.99■□□□□ 0.31
MRPL53Q96EL3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 NTF6A-201ENST00000591175 560 ntBASIC16.99■□□□□ 0.31
MRPL53Q96EL3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.99■□□□□ 0.31
MRPL53Q96EL3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 THA1P-201ENST00000590384 1145 ntBASIC16.98■□□□□ 0.31
MRPL53Q96EL3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL53Q96EL3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 AC004448.1-201ENST00000458332 883 ntBASIC16.97■□□□□ 0.31
MRPL53Q96EL3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 MIR4281-201ENST00000580852 62 ntBASIC16.97■□□□□ 0.31
MRPL53Q96EL3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.97■□□□□ 0.31
MRPL53Q96EL3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL53Q96EL3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL53Q96EL3 ESRRAP2-201ENST00000418437 1549 ntBASIC16.96■□□□□ 0.31
MRPL53Q96EL3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL53Q96EL3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.96■□□□□ 0.31
MRPL53Q96EL3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MRPL53Q96EL3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.96■□□□□ 0.31
MRPL53Q96EL3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL53Q96EL3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL53Q96EL3 AF131216.4-201ENST00000638924 1588 ntBASIC16.96■□□□□ 0.31
MRPL53Q96EL3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms