Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TRUB1Q8WWH5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRUB1Q8WWH5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB1Q8WWH5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB1Q8WWH5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 ABHD17AP4-201ENST00000411545 909 ntBASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB1Q8WWH5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 RAP2CP1-202ENST00000605179 643 ntBASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB1Q8WWH5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB1Q8WWH5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 AC007029.1-201ENST00000604183 313 ntBASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB1Q8WWH5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms