Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 AC138932.3-201ENST00000567634 1902 ntBASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 AC011298.3-201ENST00000615796 283 ntBASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 AP003733.4-201ENST00000623785 1697 ntBASIC24.91■■□□□ 1.58
TMEM40Q8WWA1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.9■■□□□ 1.58
TMEM40Q8WWA1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TMEM40Q8WWA1 AC091305.1-201ENST00000479476 895 ntBASIC24.9■■□□□ 1.58
TMEM40Q8WWA1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.9■■□□□ 1.58
TMEM40Q8WWA1 AL138724.1-201ENST00000606771 1088 ntBASIC24.9■■□□□ 1.58
TMEM40Q8WWA1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEM40Q8WWA1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TMEM40Q8WWA1 AC026271.2-201ENST00000428091 497 ntBASIC24.89■■□□□ 1.58
TMEM40Q8WWA1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.89■■□□□ 1.58
TMEM40Q8WWA1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.89■■□□□ 1.58
TMEM40Q8WWA1 AC241377.3-202ENST00000626088 1088 ntBASIC24.89■■□□□ 1.58
TMEM40Q8WWA1 AC241585.3-202ENST00000628937 1088 ntBASIC24.89■■□□□ 1.58
TMEM40Q8WWA1 AC245100.8-202ENST00000629247 1058 ntBASIC24.89■■□□□ 1.58
TMEM40Q8WWA1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
TMEM40Q8WWA1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
TMEM40Q8WWA1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TMEM40Q8WWA1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
TMEM40Q8WWA1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 AC009086.3-201ENST00000623486 1008 ntBASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TMEM40Q8WWA1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.85■■□□□ 1.57
TMEM40Q8WWA1 MIR3181-201ENST00000578512 73 ntBASIC24.85■■□□□ 1.57
TMEM40Q8WWA1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.85■■□□□ 1.57
TMEM40Q8WWA1 CA15P2-201ENST00000611168 834 ntBASIC24.85■■□□□ 1.57
TMEM40Q8WWA1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.85■■□□□ 1.57
TMEM40Q8WWA1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TMEM40Q8WWA1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.85■■□□□ 1.57
TMEM40Q8WWA1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.85■■□□□ 1.57
TMEM40Q8WWA1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TMEM40Q8WWA1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 RASA4CP-201ENST00000424092 1398 ntBASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 AC136469.2-201ENST00000623944 1028 ntBASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
TMEM40Q8WWA1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TMEM40Q8WWA1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TMEM40Q8WWA1 AC142381.3-201ENST00000568208 1670 ntBASIC24.83■■□□□ 1.57
TMEM40Q8WWA1 AC008764.7-201ENST00000593779 1081 ntBASIC24.83■■□□□ 1.57
TMEM40Q8WWA1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TMEM40Q8WWA1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
TMEM40Q8WWA1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM40Q8WWA1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM40Q8WWA1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM40Q8WWA1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.82■■□□□ 1.56
TMEM40Q8WWA1 AC027682.1-201ENST00000562846 899 ntBASIC24.82■■□□□ 1.56
TMEM40Q8WWA1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM40Q8WWA1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 AC020928.2-201ENST00000588717 2197 ntBASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.81■■□□□ 1.56
TMEM40Q8WWA1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
TMEM40Q8WWA1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM40Q8WWA1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms