Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 LINC02228-203ENST00000641970 1355 ntBASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
ARHGEF40Q8TER5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
ARHGEF40Q8TER5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
ARHGEF40Q8TER5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC34.33■■■■□ 3.09
ARHGEF40Q8TER5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC34.33■■■■□ 3.09
ARHGEF40Q8TER5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
ARHGEF40Q8TER5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
ARHGEF40Q8TER5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
ARHGEF40Q8TER5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ARHGEF40Q8TER5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC34.32■■■■□ 3.08
ARHGEF40Q8TER5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC34.32■■■■□ 3.08
ARHGEF40Q8TER5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC34.32■■■■□ 3.08
ARHGEF40Q8TER5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC34.32■■■■□ 3.08
ARHGEF40Q8TER5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
ARHGEF40Q8TER5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ARHGEF40Q8TER5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC34.32■■■■□ 3.08
ARHGEF40Q8TER5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC34.31■■■■□ 3.08
ARHGEF40Q8TER5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
ARHGEF40Q8TER5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
ARHGEF40Q8TER5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC34.3■■■■□ 3.08
ARHGEF40Q8TER5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC34.29■■■■□ 3.08
ARHGEF40Q8TER5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
ARHGEF40Q8TER5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
ARHGEF40Q8TER5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
ARHGEF40Q8TER5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
ARHGEF40Q8TER5 PPP1R14BP3-201ENST00000509033 445 ntBASIC34.29■■■■□ 3.08
ARHGEF40Q8TER5 AC066615.1-201ENST00000640911 628 ntBASIC34.29■■■■□ 3.08
ARHGEF40Q8TER5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC34.29■■■■□ 3.08
ARHGEF40Q8TER5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
ARHGEF40Q8TER5 GAS2L1P2-201ENST00000436355 1356 ntBASIC34.28■■■■□ 3.08
ARHGEF40Q8TER5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC34.28■■■■□ 3.08
ARHGEF40Q8TER5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC34.27■■■■□ 3.08
ARHGEF40Q8TER5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC34.27■■■■□ 3.08
ARHGEF40Q8TER5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC34.27■■■■□ 3.08
ARHGEF40Q8TER5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC34.27■■■■□ 3.08
ARHGEF40Q8TER5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC34.27■■■■□ 3.08
ARHGEF40Q8TER5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC34.26■■■■□ 3.08
ARHGEF40Q8TER5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC34.26■■■■□ 3.08
ARHGEF40Q8TER5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
ARHGEF40Q8TER5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
ARHGEF40Q8TER5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.07
ARHGEF40Q8TER5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
ARHGEF40Q8TER5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC34.25■■■■□ 3.07
ARHGEF40Q8TER5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC34.25■■■■□ 3.07
ARHGEF40Q8TER5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
ARHGEF40Q8TER5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC34.25■■■■□ 3.07
ARHGEF40Q8TER5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC34.25■■■■□ 3.07
ARHGEF40Q8TER5 AC026185.1-201ENST00000445748 174 ntBASIC34.25■■■■□ 3.07
ARHGEF40Q8TER5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC34.24■■■■□ 3.07
ARHGEF40Q8TER5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC34.24■■■■□ 3.07
ARHGEF40Q8TER5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC34.24■■■■□ 3.07
ARHGEF40Q8TER5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
ARHGEF40Q8TER5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC34.24■■■■□ 3.07
ARHGEF40Q8TER5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 NT5C3AP1-201ENST00000394500 1012 ntBASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 AC016769.1-201ENST00000409132 1010 ntBASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 CROCCP5-201ENST00000436658 830 ntBASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC34.23■■■■□ 3.07
ARHGEF40Q8TER5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
ARHGEF40Q8TER5 AC137761.2-201ENST00000561729 223 ntBASIC34.22■■■■□ 3.07
ARHGEF40Q8TER5 AC145350.3-201ENST00000569033 163 ntBASIC34.22■■■■□ 3.07
ARHGEF40Q8TER5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
ARHGEF40Q8TER5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
ARHGEF40Q8TER5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
ARHGEF40Q8TER5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
ARHGEF40Q8TER5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC34.21■■■■□ 3.07
ARHGEF40Q8TER5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC34.21■■■■□ 3.07
ARHGEF40Q8TER5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC34.21■■■■□ 3.07
ARHGEF40Q8TER5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
ARHGEF40Q8TER5 TMEM191A-211ENST00000637163 1067 ntBASIC34.21■■■■□ 3.07
ARHGEF40Q8TER5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC34.2■■■■□ 3.07
ARHGEF40Q8TER5 MAP2K4P1-201ENST00000438453 1195 ntBASIC34.2■■■■□ 3.07
ARHGEF40Q8TER5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC34.2■■■■□ 3.07
ARHGEF40Q8TER5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC34.2■■■■□ 3.07
ARHGEF40Q8TER5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC34.2■■■■□ 3.07
ARHGEF40Q8TER5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC34.2■■■■□ 3.07
ARHGEF40Q8TER5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms