Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 AC131274.2-201ENST00000580697 1507 ntBASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPS4Y2Q8TD47 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.9■□□□□ 0.78
RPS4Y2Q8TD47 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RPS4Y2Q8TD47 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.9■□□□□ 0.78
RPS4Y2Q8TD47 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPS4Y2Q8TD47 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.9■□□□□ 0.78
RPS4Y2Q8TD47 ALDH1A3-203ENST00000557963 1670 ntBASIC19.9■□□□□ 0.78
RPS4Y2Q8TD47 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
RPS4Y2Q8TD47 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.9■□□□□ 0.78
RPS4Y2Q8TD47 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 AC018755.3-202ENST00000596210 929 ntBASIC19.89■□□□□ 0.77
RPS4Y2Q8TD47 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y2Q8TD47 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y2Q8TD47 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y2Q8TD47 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y2Q8TD47 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RPS4Y2Q8TD47 AL592293.1-201ENST00000502889 1188 ntBASIC19.87■□□□□ 0.77
RPS4Y2Q8TD47 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y2Q8TD47 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y2Q8TD47 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS4Y2Q8TD47 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RPS4Y2Q8TD47 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
RPS4Y2Q8TD47 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.85■□□□□ 0.77
RPS4Y2Q8TD47 LONRF2P2-201ENST00000439212 571 ntBASIC19.85■□□□□ 0.77
RPS4Y2Q8TD47 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4Y2Q8TD47 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4Y2Q8TD47 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RPS4Y2Q8TD47 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4Y2Q8TD47 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS4Y2Q8TD47 AC137767.1-201ENST00000602918 1920 ntBASIC19.84■□□□□ 0.77
RPS4Y2Q8TD47 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4Y2Q8TD47 AC011551.1-201ENST00000614101 683 ntBASIC19.84■□□□□ 0.77
RPS4Y2Q8TD47 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4Y2Q8TD47 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RPS4Y2Q8TD47 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS4Y2Q8TD47 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.84■□□□□ 0.77
RPS4Y2Q8TD47 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4Y2Q8TD47 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RPS4Y2Q8TD47 ESRRAP2-201ENST00000418437 1549 ntBASIC19.83■□□□□ 0.77
RPS4Y2Q8TD47 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4Y2Q8TD47 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
RPS4Y2Q8TD47 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPS4Y2Q8TD47 MIR6765-201ENST00000614092 87 ntBASIC19.83■□□□□ 0.77
RPS4Y2Q8TD47 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.83■□□□□ 0.77
RPS4Y2Q8TD47 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y2Q8TD47 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y2Q8TD47 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y2Q8TD47 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y2Q8TD47 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y2Q8TD47 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
RPS4Y2Q8TD47 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS4Y2Q8TD47 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms