Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CCHCR1Q8TD31 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.55■■□□□ 1.36
CCHCR1Q8TD31 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCHCR1Q8TD31 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCHCR1Q8TD31 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCHCR1Q8TD31 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.54■■□□□ 1.36
CCHCR1Q8TD31 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCHCR1Q8TD31 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CCHCR1Q8TD31 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CCHCR1Q8TD31 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 RARRES2P1-201ENST00000474487 481 ntBASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCHCR1Q8TD31 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 C9orf163-202ENST00000624034 2573 ntBASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 AL022069.1-201ENST00000568025 1636 ntBASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCHCR1Q8TD31 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CCHCR1Q8TD31 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.52■■□□□ 1.35
CCHCR1Q8TD31 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CCHCR1Q8TD31 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCHCR1Q8TD31 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 DUSP8P3-201ENST00000399571 1760 ntBASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCHCR1Q8TD31 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCHCR1Q8TD31 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
CCHCR1Q8TD31 KRT18P24-201ENST00000344739 1156 ntBASIC23.49■■□□□ 1.35
CCHCR1Q8TD31 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CCHCR1Q8TD31 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
CCHCR1Q8TD31 THA1P-201ENST00000590384 1145 ntBASIC23.49■■□□□ 1.35
CCHCR1Q8TD31 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.49■■□□□ 1.35
CCHCR1Q8TD31 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CCHCR1Q8TD31 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCHCR1Q8TD31 AC103724.3-201ENST00000564481 992 ntBASIC23.48■■□□□ 1.35
CCHCR1Q8TD31 AC011551.1-201ENST00000614101 683 ntBASIC23.48■■□□□ 1.35
CCHCR1Q8TD31 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CCHCR1Q8TD31 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CCHCR1Q8TD31 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCHCR1Q8TD31 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CCHCR1Q8TD31 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCHCR1Q8TD31 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCHCR1Q8TD31 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CCHCR1Q8TD31 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCHCR1Q8TD31 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCHCR1Q8TD31 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCHCR1Q8TD31 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CCHCR1Q8TD31 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCHCR1Q8TD31 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCHCR1Q8TD31 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CCHCR1Q8TD31 AC120024.1-201ENST00000562672 995 ntBASIC23.46■■□□□ 1.35
CCHCR1Q8TD31 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CCHCR1Q8TD31 AL031848.2-201ENST00000607670 837 ntBASIC23.46■■□□□ 1.35
CCHCR1Q8TD31 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CCHCR1Q8TD31 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.46■■□□□ 1.35
CCHCR1Q8TD31 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CCHCR1Q8TD31 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
CCHCR1Q8TD31 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms