Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CNIH3Q8TBE1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNIH3Q8TBE1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.72■□□□□ 0.91
CNIH3Q8TBE1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.72■□□□□ 0.91
CNIH3Q8TBE1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CNIH3Q8TBE1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CNIH3Q8TBE1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH3Q8TBE1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH3Q8TBE1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH3Q8TBE1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH3Q8TBE1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH3Q8TBE1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.71■□□□□ 0.91
CNIH3Q8TBE1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH3Q8TBE1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 AC242852.2-201ENST00000615738 1807 ntBASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNIH3Q8TBE1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH3Q8TBE1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH3Q8TBE1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNIH3Q8TBE1 ABHD17AP4-201ENST00000411545 909 ntBASIC20.67■□□□□ 0.9
CNIH3Q8TBE1 AC060814.1-201ENST00000554326 538 ntBASIC20.67■□□□□ 0.9
CNIH3Q8TBE1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CNIH3Q8TBE1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
CNIH3Q8TBE1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH3Q8TBE1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH3Q8TBE1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.65■□□□□ 0.9
CNIH3Q8TBE1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH3Q8TBE1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH3Q8TBE1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH3Q8TBE1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNIH3Q8TBE1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.64■□□□□ 0.9
CNIH3Q8TBE1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CNIH3Q8TBE1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CNIH3Q8TBE1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.64■□□□□ 0.9
CNIH3Q8TBE1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNIH3Q8TBE1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNIH3Q8TBE1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 RP9P-202ENST00000450133 1212 ntBASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 AC093536.1-201ENST00000569153 554 ntBASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms