Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NUP43Q8NFH3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.22■□□□□ 0.99
NUP43Q8NFH3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.22■□□□□ 0.99
NUP43Q8NFH3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP43Q8NFH3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NUP43Q8NFH3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.21■□□□□ 0.99
NUP43Q8NFH3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUP43Q8NFH3 AC021242.3-201ENST00000607598 1377 ntBASIC21.21■□□□□ 0.99
NUP43Q8NFH3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.2■□□□□ 0.98
NUP43Q8NFH3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP43Q8NFH3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUP43Q8NFH3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.2■□□□□ 0.98
NUP43Q8NFH3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUP43Q8NFH3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
NUP43Q8NFH3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NUP43Q8NFH3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUP43Q8NFH3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP43Q8NFH3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP43Q8NFH3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP43Q8NFH3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP43Q8NFH3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NUP43Q8NFH3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP43Q8NFH3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUP43Q8NFH3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NUP43Q8NFH3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUP43Q8NFH3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP43Q8NFH3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.18■□□□□ 0.98
NUP43Q8NFH3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.18■□□□□ 0.98
NUP43Q8NFH3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP43Q8NFH3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP43Q8NFH3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NUP43Q8NFH3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUP43Q8NFH3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP43Q8NFH3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP43Q8NFH3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.17■□□□□ 0.98
NUP43Q8NFH3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 AC092068.2-201ENST00000590491 1708 ntBASIC21.16■□□□□ 0.98
NUP43Q8NFH3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP43Q8NFH3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 KRT125P-201ENST00000546827 989 ntBASIC21.15■□□□□ 0.98
NUP43Q8NFH3 Z92544.1-202ENST00000571933 1220 ntBASIC21.15■□□□□ 0.98
NUP43Q8NFH3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP43Q8NFH3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
NUP43Q8NFH3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NUP43Q8NFH3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NUP43Q8NFH3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NUP43Q8NFH3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP43Q8NFH3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NUP43Q8NFH3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.14■□□□□ 0.97
NUP43Q8NFH3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP43Q8NFH3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms