Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 SF1-220ENST00000626028 704 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 IRS3P-201ENST00000223076 1006 ntBASIC6.92□□□□□ -1.3
SYNE1Q8NF91 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 AC022517.1-201ENST00000592429 346 ntBASIC6.92□□□□□ -1.3
SYNE1Q8NF91 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 AC009102.2-201ENST00000606772 1639 ntBASIC6.92□□□□□ -1.3
SYNE1Q8NF91 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 AL031602.1-201ENST00000633169 911 ntBASIC6.91□□□□□ -1.3
SYNE1Q8NF91 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 REST-206ENST00000612429 1376 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 REST-207ENST00000616975 1370 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 AC006455.2-201ENST00000429931 906 ntBASIC6.91□□□□□ -1.3
SYNE1Q8NF91 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SYNE1Q8NF91 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE1Q8NF91 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 RBM38-205ENST00000440234 686 ntTSL 2 BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 HACD1-201ENST00000326961 773 ntTSL 2 BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 RHOF-204ENST00000537265 699 ntTSL 2 BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SYNE1Q8NF91 CA15P2-201ENST00000611168 834 ntBASIC6.9□□□□□ -1.31
SYNE1Q8NF91 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE1Q8NF91 GTSE1-AS1-202ENST00000623117 1518 ntBASIC6.89□□□□□ -1.31
SYNE1Q8NF91 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE1Q8NF91 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE1Q8NF91 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE1Q8NF91 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE1Q8NF91 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
SYNE1Q8NF91 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNE1Q8NF91 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms