Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 AC005703.6-201ENST00000623265 1329 ntBASIC21.33■■□□□ 1.01
EXD3Q8N9H8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.33■■□□□ 1.01
EXD3Q8N9H8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.33■■□□□ 1.01
EXD3Q8N9H8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.33■■□□□ 1
EXD3Q8N9H8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.33■■□□□ 1
EXD3Q8N9H8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EXD3Q8N9H8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.33■■□□□ 1
EXD3Q8N9H8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.33■■□□□ 1
EXD3Q8N9H8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
EXD3Q8N9H8 AL139125.2-201ENST00000623134 1869 ntBASIC21.32■■□□□ 1
EXD3Q8N9H8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.32■■□□□ 1
EXD3Q8N9H8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EXD3Q8N9H8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EXD3Q8N9H8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.32■■□□□ 1
EXD3Q8N9H8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.32■■□□□ 1
EXD3Q8N9H8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.32■■□□□ 1
EXD3Q8N9H8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.32■■□□□ 1
EXD3Q8N9H8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.32■■□□□ 1
EXD3Q8N9H8 AC099791.2-201ENST00000605725 427 ntBASIC21.32■■□□□ 1
EXD3Q8N9H8 AC092437.1-201ENST00000624794 1048 ntBASIC21.32■■□□□ 1
EXD3Q8N9H8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.32■■□□□ 1
EXD3Q8N9H8 AC097639.1-201ENST00000565519 1891 ntBASIC21.31■■□□□ 1
EXD3Q8N9H8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
EXD3Q8N9H8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.31■■□□□ 1
EXD3Q8N9H8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.31■■□□□ 1
EXD3Q8N9H8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.31■■□□□ 1
EXD3Q8N9H8 AC011298.3-201ENST00000615796 283 ntBASIC21.31■■□□□ 1
EXD3Q8N9H8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.31■■□□□ 1
EXD3Q8N9H8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EXD3Q8N9H8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.31■■□□□ 1
EXD3Q8N9H8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.31■■□□□ 1
EXD3Q8N9H8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.31■■□□□ 1
EXD3Q8N9H8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EXD3Q8N9H8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EXD3Q8N9H8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.3■■□□□ 1
EXD3Q8N9H8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.3■■□□□ 1
EXD3Q8N9H8 KRT18P5-201ENST00000436075 1291 ntBASIC21.3■■□□□ 1
EXD3Q8N9H8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.3■■□□□ 1
EXD3Q8N9H8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EXD3Q8N9H8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
EXD3Q8N9H8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.3■■□□□ 1
EXD3Q8N9H8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EXD3Q8N9H8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EXD3Q8N9H8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.3■■□□□ 1
EXD3Q8N9H8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
EXD3Q8N9H8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EXD3Q8N9H8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EXD3Q8N9H8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EXD3Q8N9H8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.29■■□□□ 1
EXD3Q8N9H8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.29■■□□□ 1
EXD3Q8N9H8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.29■■□□□ 1
EXD3Q8N9H8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.29■■□□□ 1
EXD3Q8N9H8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.29■■□□□ 1
EXD3Q8N9H8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.29■■□□□ 1
EXD3Q8N9H8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.29■■□□□ 1
EXD3Q8N9H8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EXD3Q8N9H8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.28■■□□□ 1
EXD3Q8N9H8 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.28■■□□□ 1
EXD3Q8N9H8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXD3Q8N9H8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.28■■□□□ 1
EXD3Q8N9H8 AL138724.1-201ENST00000606771 1088 ntBASIC21.28■■□□□ 1
EXD3Q8N9H8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
EXD3Q8N9H8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXD3Q8N9H8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
EXD3Q8N9H8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXD3Q8N9H8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
EXD3Q8N9H8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.28■■□□□ 1
EXD3Q8N9H8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
EXD3Q8N9H8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.28■■□□□ 1
EXD3Q8N9H8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
EXD3Q8N9H8 ID1-201ENST00000376105 1233 ntBASIC21.27■■□□□ 1
EXD3Q8N9H8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.27■■□□□ 1
EXD3Q8N9H8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EXD3Q8N9H8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.27■■□□□ 1
EXD3Q8N9H8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.27■■□□□ 1
EXD3Q8N9H8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EXD3Q8N9H8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EXD3Q8N9H8 SLC6A10P-202ENST00000431994 2058 ntBASIC21.27■□□□□ 0.99
EXD3Q8N9H8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EXD3Q8N9H8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXD3Q8N9H8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EXD3Q8N9H8 SLC47A1P1-202ENST00000449666 945 ntBASIC21.26■□□□□ 0.99
EXD3Q8N9H8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.26■□□□□ 0.99
EXD3Q8N9H8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.26■□□□□ 0.99
EXD3Q8N9H8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EXD3Q8N9H8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
EXD3Q8N9H8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EXD3Q8N9H8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXD3Q8N9H8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
EXD3Q8N9H8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms