Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 AC090877.2-201ENST00000558441 1738 ntBASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 AC016575.1-201ENST00000607026 382 ntBASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.24■□□□□ 0.83
NANOGP1Q8N7R0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 RAP2CP1-202ENST00000605179 643 ntBASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 AL024507.2-201ENST00000606070 2574 ntBASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.23■□□□□ 0.83
NANOGP1Q8N7R0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NANOGP1Q8N7R0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NANOGP1Q8N7R0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NANOGP1Q8N7R0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NANOGP1Q8N7R0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NANOGP1Q8N7R0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NANOGP1Q8N7R0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NANOGP1Q8N7R0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 AC026202.3-201ENST00000600805 1127 ntBASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGP1Q8N7R0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.2■□□□□ 0.82
NANOGP1Q8N7R0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGP1Q8N7R0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGP1Q8N7R0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGP1Q8N7R0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NANOGP1Q8N7R0 AC007029.1-201ENST00000604183 313 ntBASIC20.19■□□□□ 0.82
NANOGP1Q8N7R0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGP1Q8N7R0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGP1Q8N7R0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
NANOGP1Q8N7R0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NANOGP1Q8N7R0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NANOGP1Q8N7R0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NANOGP1Q8N7R0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NANOGP1Q8N7R0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms