Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAM1L1Q8N609 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAM1L1Q8N609 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.5■■□□□ 1.19
TRAM1L1Q8N609 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.5■■□□□ 1.19
TRAM1L1Q8N609 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.5■■□□□ 1.19
TRAM1L1Q8N609 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRAM1L1Q8N609 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAM1L1Q8N609 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAM1L1Q8N609 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.49■■□□□ 1.19
TRAM1L1Q8N609 AC131281.2-201ENST00000520478 145 ntBASIC22.49■■□□□ 1.19
TRAM1L1Q8N609 AL512631.2-201ENST00000604634 923 ntBASIC22.49■■□□□ 1.19
TRAM1L1Q8N609 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAM1L1Q8N609 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAM1L1Q8N609 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAM1L1Q8N609 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRAM1L1Q8N609 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAM1L1Q8N609 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAM1L1Q8N609 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRAM1L1Q8N609 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAM1L1Q8N609 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRAM1L1Q8N609 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRAM1L1Q8N609 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAM1L1Q8N609 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 AC009102.2-201ENST00000606772 1639 ntBASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAM1L1Q8N609 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TRAM1L1Q8N609 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRAM1L1Q8N609 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRAM1L1Q8N609 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRAM1L1Q8N609 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRAM1L1Q8N609 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TRAM1L1Q8N609 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRAM1L1Q8N609 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.45■■□□□ 1.18
TRAM1L1Q8N609 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
TRAM1L1Q8N609 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRAM1L1Q8N609 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRAM1L1Q8N609 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRAM1L1Q8N609 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.44■■□□□ 1.18
TRAM1L1Q8N609 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRAM1L1Q8N609 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRAM1L1Q8N609 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 AC008406.3-201ENST00000620001 1374 ntBASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 MIR4466-201ENST00000606121 54 ntBASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRAM1L1Q8N609 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TRAM1L1Q8N609 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.42■■□□□ 1.18
TRAM1L1Q8N609 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
TRAM1L1Q8N609 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRAM1L1Q8N609 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRAM1L1Q8N609 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TRAM1L1Q8N609 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRAM1L1Q8N609 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.4■■□□□ 1.18
TRAM1L1Q8N609 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRAM1L1Q8N609 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRAM1L1Q8N609 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.4■■□□□ 1.18
TRAM1L1Q8N609 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms