Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC35.84■■■■□ 3.33
VPS8Q8N3P4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
VPS8Q8N3P4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC35.84■■■■□ 3.33
VPS8Q8N3P4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
VPS8Q8N3P4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC35.83■■■■□ 3.33
VPS8Q8N3P4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC35.83■■■■□ 3.33
VPS8Q8N3P4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC35.83■■■■□ 3.33
VPS8Q8N3P4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC35.83■■■■□ 3.33
VPS8Q8N3P4 SRD5A1P1-201ENST00000442297 786 ntBASIC35.82■■■■□ 3.32
VPS8Q8N3P4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC35.82■■■■□ 3.32
VPS8Q8N3P4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC35.81■■■■□ 3.32
VPS8Q8N3P4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC35.81■■■■□ 3.32
VPS8Q8N3P4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC35.81■■■■□ 3.32
VPS8Q8N3P4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC35.81■■■■□ 3.32
VPS8Q8N3P4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC35.81■■■■□ 3.32
VPS8Q8N3P4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
VPS8Q8N3P4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC35.81■■■■□ 3.32
VPS8Q8N3P4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
VPS8Q8N3P4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC35.8■■■■□ 3.32
VPS8Q8N3P4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC35.8■■■■□ 3.32
VPS8Q8N3P4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC35.8■■■■□ 3.32
VPS8Q8N3P4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC35.8■■■■□ 3.32
VPS8Q8N3P4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
VPS8Q8N3P4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
VPS8Q8N3P4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC35.79■■■■□ 3.32
VPS8Q8N3P4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC35.79■■■■□ 3.32
VPS8Q8N3P4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
VPS8Q8N3P4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC35.78■■■■□ 3.32
VPS8Q8N3P4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC35.78■■■■□ 3.32
VPS8Q8N3P4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
VPS8Q8N3P4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC35.78■■■■□ 3.32
VPS8Q8N3P4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
VPS8Q8N3P4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC35.78■■■■□ 3.32
VPS8Q8N3P4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
VPS8Q8N3P4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC35.76■■■■□ 3.32
VPS8Q8N3P4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
VPS8Q8N3P4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
VPS8Q8N3P4 AC096631.2-201ENST00000436136 790 ntBASIC35.75■■■■□ 3.31
VPS8Q8N3P4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC35.75■■■■□ 3.31
VPS8Q8N3P4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
VPS8Q8N3P4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC35.75■■■■□ 3.31
VPS8Q8N3P4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
VPS8Q8N3P4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC35.74■■■■□ 3.31
VPS8Q8N3P4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC35.74■■■■□ 3.31
VPS8Q8N3P4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC35.74■■■■□ 3.31
VPS8Q8N3P4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC35.74■■■■□ 3.31
VPS8Q8N3P4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC35.74■■■■□ 3.31
VPS8Q8N3P4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
VPS8Q8N3P4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
VPS8Q8N3P4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
VPS8Q8N3P4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
VPS8Q8N3P4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC35.73■■■■□ 3.31
VPS8Q8N3P4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
VPS8Q8N3P4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
VPS8Q8N3P4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC35.72■■■■□ 3.31
VPS8Q8N3P4 AL139246.5-201ENST00000606645 996 ntBASIC35.72■■■■□ 3.31
VPS8Q8N3P4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC35.72■■■■□ 3.31
VPS8Q8N3P4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC35.72■■■■□ 3.31
VPS8Q8N3P4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC35.71■■■■□ 3.31
VPS8Q8N3P4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
VPS8Q8N3P4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
VPS8Q8N3P4 MIR638-201ENST00000385237 100 ntBASIC35.71■■■■□ 3.31
VPS8Q8N3P4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
VPS8Q8N3P4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC35.71■■■■□ 3.31
VPS8Q8N3P4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC35.7■■■■□ 3.31
VPS8Q8N3P4 AC006455.2-201ENST00000429931 906 ntBASIC35.7■■■■□ 3.31
VPS8Q8N3P4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC35.7■■■■□ 3.3
VPS8Q8N3P4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC35.69■■■■□ 3.3
VPS8Q8N3P4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC35.69■■■■□ 3.3
VPS8Q8N3P4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
VPS8Q8N3P4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC35.69■■■■□ 3.3
VPS8Q8N3P4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
VPS8Q8N3P4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
VPS8Q8N3P4 ABCB10P4-201ENST00000566803 2184 ntBASIC35.69■■■■□ 3.3
VPS8Q8N3P4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
VPS8Q8N3P4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC35.68■■■■□ 3.3
VPS8Q8N3P4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
VPS8Q8N3P4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC35.68■■■■□ 3.3
VPS8Q8N3P4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
VPS8Q8N3P4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
VPS8Q8N3P4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC35.68■■■■□ 3.3
VPS8Q8N3P4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
VPS8Q8N3P4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
VPS8Q8N3P4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC35.67■■■■□ 3.3
VPS8Q8N3P4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
VPS8Q8N3P4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC35.67■■■■□ 3.3
VPS8Q8N3P4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
VPS8Q8N3P4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
VPS8Q8N3P4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
VPS8Q8N3P4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC35.66■■■■□ 3.3
VPS8Q8N3P4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
VPS8Q8N3P4 AC099791.2-201ENST00000605725 427 ntBASIC35.66■■■■□ 3.3
VPS8Q8N3P4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
VPS8Q8N3P4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
VPS8Q8N3P4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
VPS8Q8N3P4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
VPS8Q8N3P4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC35.65■■■■□ 3.3
VPS8Q8N3P4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC35.65■■■■□ 3.3
VPS8Q8N3P4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC35.64■■■■□ 3.3
VPS8Q8N3P4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms