Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.29■■□□□ 1.64
DHX40Q8IX18 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
DHX40Q8IX18 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
DHX40Q8IX18 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DHX40Q8IX18 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DHX40Q8IX18 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
DHX40Q8IX18 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DHX40Q8IX18 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.29■■□□□ 1.64
DHX40Q8IX18 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.29■■□□□ 1.64
DHX40Q8IX18 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DHX40Q8IX18 U85056.1-201ENST00000616429 682 ntBASIC25.29■■□□□ 1.64
DHX40Q8IX18 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.29■■□□□ 1.64
DHX40Q8IX18 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.29■■□□□ 1.64
DHX40Q8IX18 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DHX40Q8IX18 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DHX40Q8IX18 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
DHX40Q8IX18 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DHX40Q8IX18 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.28■■□□□ 1.64
DHX40Q8IX18 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DHX40Q8IX18 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DHX40Q8IX18 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
DHX40Q8IX18 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DHX40Q8IX18 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
DHX40Q8IX18 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
DHX40Q8IX18 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
DHX40Q8IX18 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.27■■□□□ 1.64
DHX40Q8IX18 ECEL1P1-201ENST00000373592 1742 ntBASIC25.27■■□□□ 1.64
DHX40Q8IX18 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.27■■□□□ 1.64
DHX40Q8IX18 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.27■■□□□ 1.64
DHX40Q8IX18 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.27■■□□□ 1.64
DHX40Q8IX18 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DHX40Q8IX18 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
DHX40Q8IX18 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DHX40Q8IX18 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
DHX40Q8IX18 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DHX40Q8IX18 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DHX40Q8IX18 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DHX40Q8IX18 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DHX40Q8IX18 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.26■■□□□ 1.63
DHX40Q8IX18 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DHX40Q8IX18 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DHX40Q8IX18 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.26■■□□□ 1.63
DHX40Q8IX18 AL592293.1-201ENST00000502889 1188 ntBASIC25.25■■□□□ 1.63
DHX40Q8IX18 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.25■■□□□ 1.63
DHX40Q8IX18 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
DHX40Q8IX18 AL022069.1-201ENST00000568025 1636 ntBASIC25.25■■□□□ 1.63
DHX40Q8IX18 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.25■■□□□ 1.63
DHX40Q8IX18 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.25■■□□□ 1.63
DHX40Q8IX18 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
DHX40Q8IX18 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DHX40Q8IX18 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DHX40Q8IX18 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.24■■□□□ 1.63
DHX40Q8IX18 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DHX40Q8IX18 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.24■■□□□ 1.63
DHX40Q8IX18 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
DHX40Q8IX18 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DHX40Q8IX18 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.24■■□□□ 1.63
DHX40Q8IX18 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DHX40Q8IX18 AC018755.3-202ENST00000596210 929 ntBASIC25.24■■□□□ 1.63
DHX40Q8IX18 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DHX40Q8IX18 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.23■■□□□ 1.63
DHX40Q8IX18 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
DHX40Q8IX18 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
DHX40Q8IX18 AC131274.2-201ENST00000580697 1507 ntBASIC25.23■■□□□ 1.63
DHX40Q8IX18 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DHX40Q8IX18 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DHX40Q8IX18 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DHX40Q8IX18 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
DHX40Q8IX18 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DHX40Q8IX18 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
DHX40Q8IX18 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
DHX40Q8IX18 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
DHX40Q8IX18 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DHX40Q8IX18 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
DHX40Q8IX18 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DHX40Q8IX18 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DHX40Q8IX18 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DHX40Q8IX18 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.22■■□□□ 1.63
DHX40Q8IX18 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.21■■□□□ 1.63
DHX40Q8IX18 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.21■■□□□ 1.63
DHX40Q8IX18 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.21■■□□□ 1.63
DHX40Q8IX18 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.21■■□□□ 1.63
DHX40Q8IX18 AC012354.3-201ENST00000623734 483 ntBASIC25.21■■□□□ 1.63
DHX40Q8IX18 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
DHX40Q8IX18 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
DHX40Q8IX18 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
DHX40Q8IX18 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.2■■□□□ 1.63
DHX40Q8IX18 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
DHX40Q8IX18 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
DHX40Q8IX18 ALDH1A3-203ENST00000557963 1670 ntBASIC25.2■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms