Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM59Q8IWR1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 SNX5-217ENST00000606557 1087 ntBASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.73■■□□□ 1.55
TRIM59Q8IWR1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.72■■□□□ 1.55
TRIM59Q8IWR1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM59Q8IWR1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
TRIM59Q8IWR1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.7■■□□□ 1.55
TRIM59Q8IWR1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TRIM59Q8IWR1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TRIM59Q8IWR1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
TRIM59Q8IWR1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM59Q8IWR1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.7■■□□□ 1.54
TRIM59Q8IWR1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.7■■□□□ 1.54
TRIM59Q8IWR1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.7■■□□□ 1.54
TRIM59Q8IWR1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.7■■□□□ 1.54
TRIM59Q8IWR1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
TRIM59Q8IWR1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM59Q8IWR1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.69■■□□□ 1.54
TRIM59Q8IWR1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM59Q8IWR1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM59Q8IWR1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM59Q8IWR1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
TRIM59Q8IWR1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM59Q8IWR1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.68■■□□□ 1.54
TRIM59Q8IWR1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM59Q8IWR1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM59Q8IWR1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
TRIM59Q8IWR1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM59Q8IWR1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.67■■□□□ 1.54
TRIM59Q8IWR1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM59Q8IWR1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM59Q8IWR1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM59Q8IWR1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM59Q8IWR1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM59Q8IWR1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
TRIM59Q8IWR1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM59Q8IWR1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM59Q8IWR1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
TRIM59Q8IWR1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM59Q8IWR1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM59Q8IWR1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM59Q8IWR1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM59Q8IWR1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 AC021242.3-201ENST00000607598 1377 ntBASIC24.65■■□□□ 1.54
TRIM59Q8IWR1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM59Q8IWR1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.64■■□□□ 1.54
TRIM59Q8IWR1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM59Q8IWR1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM59Q8IWR1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TRIM59Q8IWR1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms