Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
SFTPA1Q8IWL2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SFTPA1Q8IWL2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SFTPA1Q8IWL2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SFTPA1Q8IWL2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SFTPA1Q8IWL2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SFTPA1Q8IWL2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SFTPA1Q8IWL2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SFTPA1Q8IWL2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 AC027682.1-201ENST00000562846 899 ntBASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 AL138724.1-201ENST00000606771 1088 ntBASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 AC009086.3-201ENST00000623486 1008 ntBASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SFTPA1Q8IWL2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
SFTPA1Q8IWL2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.12■■□□□ 1.29
SFTPA1Q8IWL2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SFTPA1Q8IWL2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SFTPA1Q8IWL2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.12■■□□□ 1.29
SFTPA1Q8IWL2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.12■■□□□ 1.29
SFTPA1Q8IWL2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
SFTPA1Q8IWL2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 AC136469.2-201ENST00000623944 1028 ntBASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 AC241377.3-202ENST00000626088 1088 ntBASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 AC241585.3-202ENST00000628937 1088 ntBASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 AC245100.8-202ENST00000629247 1058 ntBASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 ALDH1A3-203ENST00000557963 1670 ntBASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SFTPA1Q8IWL2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 AC087623.3-201ENST00000607047 1098 ntBASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SFTPA1Q8IWL2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SFTPA1Q8IWL2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SFTPA1Q8IWL2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.09■■□□□ 1.29
SFTPA1Q8IWL2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SFTPA1Q8IWL2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SFTPA1Q8IWL2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.09■■□□□ 1.29
SFTPA1Q8IWL2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SFTPA1Q8IWL2 MIR5787-201ENST00000611784 55 ntBASIC23.09■■□□□ 1.29
SFTPA1Q8IWL2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SFTPA1Q8IWL2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SFTPA1Q8IWL2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SFTPA1Q8IWL2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.08■■□□□ 1.29
SFTPA1Q8IWL2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.08■■□□□ 1.29
SFTPA1Q8IWL2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.08■■□□□ 1.29
SFTPA1Q8IWL2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SFTPA1Q8IWL2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SFTPA1Q8IWL2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.08■■□□□ 1.28
SFTPA1Q8IWL2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.08■■□□□ 1.28
SFTPA1Q8IWL2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SFTPA1Q8IWL2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 MIR6821-201ENST00000617625 74 ntBASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SFTPA1Q8IWL2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.05■■□□□ 1.28
SFTPA1Q8IWL2 pRNA.6-201ENST00000610482 90 ntBASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms