Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
LRRC28Q86X40 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC28Q86X40 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
LRRC28Q86X40 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC28Q86X40 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LRRC28Q86X40 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LRRC28Q86X40 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LRRC28Q86X40 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LRRC28Q86X40 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 AC019171.1-201ENST00000601251 1056 ntBASIC20.07■□□□□ 0.8
LRRC28Q86X40 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC28Q86X40 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRC28Q86X40 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRC28Q86X40 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC28Q86X40 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC28Q86X40 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC28Q86X40 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRC28Q86X40 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC28Q86X40 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC28Q86X40 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRRC28Q86X40 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC28Q86X40 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC28Q86X40 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC28Q86X40 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LRRC28Q86X40 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC28Q86X40 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC28Q86X40 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC28Q86X40 RARRES2P1-201ENST00000474487 481 ntBASIC20.05■□□□□ 0.8
LRRC28Q86X40 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC28Q86X40 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC28Q86X40 PVT1_1.1-201ENST00000615125 194 ntBASIC20.05■□□□□ 0.8
LRRC28Q86X40 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC28Q86X40 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC28Q86X40 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC28Q86X40 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC28Q86X40 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC28Q86X40 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC28Q86X40 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC28Q86X40 LONRF2P2-201ENST00000439212 571 ntBASIC20.04■□□□□ 0.8
LRRC28Q86X40 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC28Q86X40 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC28Q86X40 GUSBP5-202ENST00000510805 1989 ntBASIC20.04■□□□□ 0.8
LRRC28Q86X40 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC28Q86X40 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC28Q86X40 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC28Q86X40 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC28Q86X40 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC28Q86X40 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC28Q86X40 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
LRRC28Q86X40 C1orf229-201ENST00000623686 2258 ntBASIC20.04■□□□□ 0.8
LRRC28Q86X40 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRC28Q86X40 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC28Q86X40 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LRRC28Q86X40 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC28Q86X40 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRC28Q86X40 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRC28Q86X40 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC28Q86X40 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRRC28Q86X40 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LRRC28Q86X40 DUSP8P3-201ENST00000399571 1760 ntBASIC20.03■□□□□ 0.8
LRRC28Q86X40 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC28Q86X40 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC28Q86X40 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.02■□□□□ 0.8
LRRC28Q86X40 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC28Q86X40 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC28Q86X40 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
LRRC28Q86X40 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC28Q86X40 ANOS2P-203ENST00000472227 1816 ntBASIC20.02■□□□□ 0.79
LRRC28Q86X40 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.02■□□□□ 0.79
LRRC28Q86X40 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.02■□□□□ 0.79
LRRC28Q86X40 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC28Q86X40 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC28Q86X40 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC28Q86X40 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC28Q86X40 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC28Q86X40 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
LRRC28Q86X40 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LRRC28Q86X40 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LRRC28Q86X40 ECEL1P1-201ENST00000373592 1742 ntBASIC20.01■□□□□ 0.79
LRRC28Q86X40 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms