Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC190Q86UF4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC190Q86UF4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC190Q86UF4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 AC008813.1-201ENST00000536597 885 ntBASIC19.78■□□□□ 0.76
CCDC190Q86UF4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC190Q86UF4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 AC092667.1-201ENST00000434301 2586 ntBASIC19.77■□□□□ 0.76
CCDC190Q86UF4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC190Q86UF4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC190Q86UF4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC190Q86UF4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC190Q86UF4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC190Q86UF4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC190Q86UF4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC190Q86UF4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC190Q86UF4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
CCDC190Q86UF4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC190Q86UF4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC190Q86UF4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC190Q86UF4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 AL161729.1-201ENST00000604104 1402 ntBASIC19.74■□□□□ 0.75
CCDC190Q86UF4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC190Q86UF4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC190Q86UF4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms