Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RSPH3Q86UC2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RSPH3Q86UC2 AC135731.1-201ENST00000569415 2548 ntBASIC25.05■■□□□ 1.6
RSPH3Q86UC2 AC026271.2-201ENST00000428091 497 ntBASIC25.05■■□□□ 1.6
RSPH3Q86UC2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.05■■□□□ 1.6
RSPH3Q86UC2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.05■■□□□ 1.6
RSPH3Q86UC2 AC008764.7-201ENST00000593779 1081 ntBASIC25.05■■□□□ 1.6
RSPH3Q86UC2 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.05■■□□□ 1.6
RSPH3Q86UC2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RSPH3Q86UC2 AC136469.2-201ENST00000623944 1028 ntBASIC25.05■■□□□ 1.6
RSPH3Q86UC2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RSPH3Q86UC2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RSPH3Q86UC2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RSPH3Q86UC2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RSPH3Q86UC2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RSPH3Q86UC2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.04■■□□□ 1.6
RSPH3Q86UC2 ALDH1A3-203ENST00000557963 1670 ntBASIC25.04■■□□□ 1.6
RSPH3Q86UC2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
RSPH3Q86UC2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RSPH3Q86UC2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RSPH3Q86UC2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RSPH3Q86UC2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.03■■□□□ 1.6
RSPH3Q86UC2 MIR5787-201ENST00000611784 55 ntBASIC25.03■■□□□ 1.6
RSPH3Q86UC2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RSPH3Q86UC2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RSPH3Q86UC2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RSPH3Q86UC2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RSPH3Q86UC2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.02■■□□□ 1.6
RSPH3Q86UC2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.02■■□□□ 1.6
RSPH3Q86UC2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.02■■□□□ 1.6
RSPH3Q86UC2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.02■■□□□ 1.6
RSPH3Q86UC2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RSPH3Q86UC2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
RSPH3Q86UC2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
RSPH3Q86UC2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RSPH3Q86UC2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.01■■□□□ 1.59
RSPH3Q86UC2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RSPH3Q86UC2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
RSPH3Q86UC2 AC006455.2-201ENST00000429931 906 ntBASIC25.01■■□□□ 1.59
RSPH3Q86UC2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.01■■□□□ 1.59
RSPH3Q86UC2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RSPH3Q86UC2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RSPH3Q86UC2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
RSPH3Q86UC2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RSPH3Q86UC2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25■■□□□ 1.59
RSPH3Q86UC2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25■■□□□ 1.59
RSPH3Q86UC2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25■■□□□ 1.59
RSPH3Q86UC2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25■■□□□ 1.59
RSPH3Q86UC2 AC099791.1-201ENST00000416440 715 ntBASIC25■■□□□ 1.59
RSPH3Q86UC2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
RSPH3Q86UC2 MIR3181-201ENST00000578512 73 ntBASIC25■■□□□ 1.59
RSPH3Q86UC2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25■■□□□ 1.59
RSPH3Q86UC2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RSPH3Q86UC2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
RSPH3Q86UC2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RSPH3Q86UC2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RSPH3Q86UC2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.99■■□□□ 1.59
RSPH3Q86UC2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RSPH3Q86UC2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.99■■□□□ 1.59
RSPH3Q86UC2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.99■■□□□ 1.59
RSPH3Q86UC2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RSPH3Q86UC2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RSPH3Q86UC2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RSPH3Q86UC2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RSPH3Q86UC2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RSPH3Q86UC2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.98■■□□□ 1.59
RSPH3Q86UC2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RSPH3Q86UC2 AP003733.4-201ENST00000623785 1697 ntBASIC24.97■■□□□ 1.59
RSPH3Q86UC2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.97■■□□□ 1.59
RSPH3Q86UC2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RSPH3Q86UC2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RSPH3Q86UC2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RSPH3Q86UC2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RSPH3Q86UC2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RSPH3Q86UC2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
RSPH3Q86UC2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 AC233992.3-201ENST00000607491 485 ntBASIC24.96■■□□□ 1.59
RSPH3Q86UC2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RSPH3Q86UC2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RSPH3Q86UC2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.95■■□□□ 1.58
RSPH3Q86UC2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RSPH3Q86UC2 BX842568.3-201ENST00000418104 571 ntBASIC24.95■■□□□ 1.58
RSPH3Q86UC2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.95■■□□□ 1.58
RSPH3Q86UC2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RSPH3Q86UC2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
RSPH3Q86UC2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
RSPH3Q86UC2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RSPH3Q86UC2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
RSPH3Q86UC2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RSPH3Q86UC2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms