Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPNS3Q6ZMD2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPNS3Q6ZMD2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPNS3Q6ZMD2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.56■□□□□ 0.72
SPNS3Q6ZMD2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.56■□□□□ 0.72
SPNS3Q6ZMD2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.56■□□□□ 0.72
SPNS3Q6ZMD2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.56■□□□□ 0.72
SPNS3Q6ZMD2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPNS3Q6ZMD2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 ABHD17AP1-201ENST00000358206 933 ntBASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 DUX4L2-201ENST00000561772 1275 ntBASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 DUX4L6-201ENST00000626483 1275 ntBASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 DUX4L1-201ENST00000627662 1275 ntBASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 DUX4L8-201ENST00000629013 1275 ntBASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 DUX4L3-201ENST00000630187 1275 ntBASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 DUX4L7-201ENST00000630678 1275 ntBASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 DUX4L5-201ENST00000630834 1275 ntBASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPNS3Q6ZMD2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.54■□□□□ 0.72
SPNS3Q6ZMD2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.53■□□□□ 0.72
SPNS3Q6ZMD2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPNS3Q6ZMD2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPNS3Q6ZMD2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPNS3Q6ZMD2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SPNS3Q6ZMD2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SPNS3Q6ZMD2 AL031602.1-201ENST00000633169 911 ntBASIC19.52■□□□□ 0.72
SPNS3Q6ZMD2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPNS3Q6ZMD2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPNS3Q6ZMD2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPNS3Q6ZMD2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.52■□□□□ 0.71
SPNS3Q6ZMD2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.51■□□□□ 0.71
SPNS3Q6ZMD2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPNS3Q6ZMD2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPNS3Q6ZMD2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.5■□□□□ 0.71
SPNS3Q6ZMD2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.5■□□□□ 0.71
SPNS3Q6ZMD2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.5■□□□□ 0.71
SPNS3Q6ZMD2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.5■□□□□ 0.71
SPNS3Q6ZMD2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.5■□□□□ 0.71
SPNS3Q6ZMD2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.5■□□□□ 0.71
SPNS3Q6ZMD2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 AC233992.3-201ENST00000607491 485 ntBASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPNS3Q6ZMD2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPNS3Q6ZMD2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPNS3Q6ZMD2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SPNS3Q6ZMD2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms