Protein–RNA interactions for Protein: Q6P1M0

SLC27A4, Long-chain fatty acid transport protein 4, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4Q6P1M0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC27A4Q6P1M0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC27A4Q6P1M0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC27A4Q6P1M0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC27A4Q6P1M0 EP400NL-214ENST00000641289 2402 ntBASIC20.58■□□□□ 0.88
SLC27A4Q6P1M0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC27A4Q6P1M0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC27A4Q6P1M0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SLC27A4Q6P1M0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A4Q6P1M0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A4Q6P1M0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC27A4Q6P1M0 U85056.1-201ENST00000616429 682 ntBASIC20.57■□□□□ 0.88
SLC27A4Q6P1M0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A4Q6P1M0 CLDN5-201ENST00000403084 2357 ntBASIC20.57■□□□□ 0.88
SLC27A4Q6P1M0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC27A4Q6P1M0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A4Q6P1M0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A4Q6P1M0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC27A4Q6P1M0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC27A4Q6P1M0 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC27A4Q6P1M0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A4Q6P1M0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
SLC27A4Q6P1M0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A4Q6P1M0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A4Q6P1M0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A4Q6P1M0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SLC27A4Q6P1M0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC27A4Q6P1M0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A4Q6P1M0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A4Q6P1M0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SLC27A4Q6P1M0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SLC27A4Q6P1M0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A4Q6P1M0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A4Q6P1M0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC27A4Q6P1M0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 DUX4L9-201ENST00000449051 1259 ntBASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 ALDH1A3-203ENST00000557963 1670 ntBASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC27A4Q6P1M0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC27A4Q6P1M0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC27A4Q6P1M0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC27A4Q6P1M0 GUSBP5-202ENST00000510805 1989 ntBASIC20.52■□□□□ 0.88
SLC27A4Q6P1M0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC27A4Q6P1M0 AC011551.1-201ENST00000614101 683 ntBASIC20.52■□□□□ 0.88
SLC27A4Q6P1M0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC27A4Q6P1M0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC27A4Q6P1M0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
SLC27A4Q6P1M0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SLC27A4Q6P1M0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 LONRF2P2-201ENST00000439212 571 ntBASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC27A4Q6P1M0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC27A4Q6P1M0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC27A4Q6P1M0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC27A4Q6P1M0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC27A4Q6P1M0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC27A4Q6P1M0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms