Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 DUX4L29-201ENST00000425409 679 ntBASIC21.37■■□□□ 1.01
LPCAT4Q643R3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LPCAT4Q643R3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LPCAT4Q643R3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.36■■□□□ 1.01
LPCAT4Q643R3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LPCAT4Q643R3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LPCAT4Q643R3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LPCAT4Q643R3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.36■■□□□ 1.01
LPCAT4Q643R3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LPCAT4Q643R3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LPCAT4Q643R3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.35■■□□□ 1.01
LPCAT4Q643R3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LPCAT4Q643R3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.35■■□□□ 1.01
LPCAT4Q643R3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
LPCAT4Q643R3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.34■■□□□ 1.01
LPCAT4Q643R3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
LPCAT4Q643R3 AC073130.3-201ENST00000624389 2278 ntBASIC21.34■■□□□ 1.01
LPCAT4Q643R3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LPCAT4Q643R3 HLA-V-202ENST00000446817 847 ntBASIC21.34■■□□□ 1.01
LPCAT4Q643R3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.34■■□□□ 1.01
LPCAT4Q643R3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
LPCAT4Q643R3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LPCAT4Q643R3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.34■■□□□ 1.01
LPCAT4Q643R3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LPCAT4Q643R3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LPCAT4Q643R3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.33■■□□□ 1
LPCAT4Q643R3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.33■■□□□ 1
LPCAT4Q643R3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LPCAT4Q643R3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.33■■□□□ 1
LPCAT4Q643R3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
LPCAT4Q643R3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LPCAT4Q643R3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT4Q643R3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT4Q643R3 FBXW4P1-201ENST00000426721 2239 ntBASIC21.32■■□□□ 1
LPCAT4Q643R3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT4Q643R3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.32■■□□□ 1
LPCAT4Q643R3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LPCAT4Q643R3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT4Q643R3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT4Q643R3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT4Q643R3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.32■■□□□ 1
LPCAT4Q643R3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.32■■□□□ 1
LPCAT4Q643R3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT4Q643R3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LPCAT4Q643R3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.31■■□□□ 1
LPCAT4Q643R3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.31■■□□□ 1
LPCAT4Q643R3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LPCAT4Q643R3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.31■■□□□ 1
LPCAT4Q643R3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LPCAT4Q643R3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LPCAT4Q643R3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LPCAT4Q643R3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LPCAT4Q643R3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LPCAT4Q643R3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LPCAT4Q643R3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LPCAT4Q643R3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.31■■□□□ 1
LPCAT4Q643R3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.3■■□□□ 1
LPCAT4Q643R3 ESRRAP2-201ENST00000418437 1549 ntBASIC21.3■■□□□ 1
LPCAT4Q643R3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LPCAT4Q643R3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LPCAT4Q643R3 C11orf96-202ENST00000528572 1834 ntBASIC21.3■■□□□ 1
LPCAT4Q643R3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LPCAT4Q643R3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LPCAT4Q643R3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.3■■□□□ 1
LPCAT4Q643R3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LPCAT4Q643R3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LPCAT4Q643R3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
LPCAT4Q643R3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.3■■□□□ 1
LPCAT4Q643R3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
LPCAT4Q643R3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LPCAT4Q643R3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LPCAT4Q643R3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LPCAT4Q643R3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LPCAT4Q643R3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LPCAT4Q643R3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.29■■□□□ 1
LPCAT4Q643R3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
LPCAT4Q643R3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
LPCAT4Q643R3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.29■■□□□ 1
LPCAT4Q643R3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.29■■□□□ 1
LPCAT4Q643R3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LPCAT4Q643R3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LPCAT4Q643R3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.28■■□□□ 1
LPCAT4Q643R3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LPCAT4Q643R3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LPCAT4Q643R3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.28■■□□□ 1
LPCAT4Q643R3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LPCAT4Q643R3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms