Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 ID1-201ENST00000376105 1233 ntBASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 pRNA.6-201ENST00000610482 90 ntBASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 pRNA.5-201ENST00000612139 90 ntBASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 pRNA.11-201ENST00000618423 90 ntBASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 pRNA.13-201ENST00000619112 90 ntBASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 DUSP8P4-201ENST00000399538 1761 ntBASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13DQ5THJ4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VPS13DQ5THJ4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13DQ5THJ4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13DQ5THJ4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13DQ5THJ4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13DQ5THJ4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13DQ5THJ4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13DQ5THJ4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13DQ5THJ4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VPS13DQ5THJ4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 AL022069.1-201ENST00000568025 1636 ntBASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC15.48■□□□□ 0.07
VPS13DQ5THJ4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 AC092803.2-201ENST00000564287 1899 ntBASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13DQ5THJ4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 AC012414.1-201ENST00000556676 535 ntBASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS13DQ5THJ4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
VPS13DQ5THJ4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 AL121749.1-202ENST00000609313 2153 ntBASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 AC004911.1-201ENST00000416316 871 ntBASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VPS13DQ5THJ4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms