Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VARS2Q5ST30 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
VARS2Q5ST30 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VARS2Q5ST30 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.17■■□□□ 1.46
VARS2Q5ST30 MIR4767-201ENST00000582827 78 ntBASIC24.17■■□□□ 1.46
VARS2Q5ST30 AC241377.3-202ENST00000626088 1088 ntBASIC24.17■■□□□ 1.46
VARS2Q5ST30 AC241585.3-202ENST00000628937 1088 ntBASIC24.17■■□□□ 1.46
VARS2Q5ST30 AC245100.8-202ENST00000629247 1058 ntBASIC24.17■■□□□ 1.46
VARS2Q5ST30 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.17■■□□□ 1.46
VARS2Q5ST30 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VARS2Q5ST30 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
VARS2Q5ST30 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
VARS2Q5ST30 AF213884.3-201ENST00000563833 479 ntBASIC24.16■■□□□ 1.46
VARS2Q5ST30 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.16■■□□□ 1.46
VARS2Q5ST30 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VARS2Q5ST30 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VARS2Q5ST30 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.15■■□□□ 1.46
VARS2Q5ST30 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VARS2Q5ST30 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VARS2Q5ST30 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.15■■□□□ 1.46
VARS2Q5ST30 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
VARS2Q5ST30 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
VARS2Q5ST30 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.15■■□□□ 1.46
VARS2Q5ST30 AL136967.2-201ENST00000623968 743 ntBASIC24.15■■□□□ 1.46
VARS2Q5ST30 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VARS2Q5ST30 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
VARS2Q5ST30 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VARS2Q5ST30 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
VARS2Q5ST30 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
VARS2Q5ST30 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
VARS2Q5ST30 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.14■■□□□ 1.45
VARS2Q5ST30 AC006455.2-201ENST00000429931 906 ntBASIC24.14■■□□□ 1.45
VARS2Q5ST30 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
VARS2Q5ST30 AP001330.3-201ENST00000520123 633 ntBASIC24.14■■□□□ 1.45
VARS2Q5ST30 AC020928.2-201ENST00000588717 2197 ntBASIC24.14■■□□□ 1.45
VARS2Q5ST30 AL138724.1-201ENST00000606771 1088 ntBASIC24.14■■□□□ 1.45
VARS2Q5ST30 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
VARS2Q5ST30 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
VARS2Q5ST30 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
VARS2Q5ST30 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VARS2Q5ST30 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VARS2Q5ST30 MIR939-201ENST00000401314 82 ntBASIC24.13■■□□□ 1.45
VARS2Q5ST30 AC011298.3-201ENST00000615796 283 ntBASIC24.13■■□□□ 1.45
VARS2Q5ST30 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.13■■□□□ 1.45
VARS2Q5ST30 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.13■■□□□ 1.45
VARS2Q5ST30 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VARS2Q5ST30 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.13■■□□□ 1.45
VARS2Q5ST30 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
VARS2Q5ST30 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.12■■□□□ 1.45
VARS2Q5ST30 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
VARS2Q5ST30 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
VARS2Q5ST30 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.12■■□□□ 1.45
VARS2Q5ST30 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.12■■□□□ 1.45
VARS2Q5ST30 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.12■■□□□ 1.45
VARS2Q5ST30 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
VARS2Q5ST30 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
VARS2Q5ST30 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.11■■□□□ 1.45
VARS2Q5ST30 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VARS2Q5ST30 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VARS2Q5ST30 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VARS2Q5ST30 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.11■■□□□ 1.45
VARS2Q5ST30 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VARS2Q5ST30 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.11■■□□□ 1.45
VARS2Q5ST30 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.11■■□□□ 1.45
VARS2Q5ST30 AC104564.3-201ENST00000582367 638 ntBASIC24.11■■□□□ 1.45
VARS2Q5ST30 AC009086.3-201ENST00000623486 1008 ntBASIC24.11■■□□□ 1.45
VARS2Q5ST30 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
VARS2Q5ST30 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
VARS2Q5ST30 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
VARS2Q5ST30 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.1■■□□□ 1.45
VARS2Q5ST30 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
VARS2Q5ST30 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.1■■□□□ 1.45
VARS2Q5ST30 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.1■■□□□ 1.45
VARS2Q5ST30 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.1■■□□□ 1.45
VARS2Q5ST30 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
VARS2Q5ST30 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
VARS2Q5ST30 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
VARS2Q5ST30 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
VARS2Q5ST30 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.1■■□□□ 1.45
VARS2Q5ST30 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.09■■□□□ 1.45
VARS2Q5ST30 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.09■■□□□ 1.45
VARS2Q5ST30 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.09■■□□□ 1.45
VARS2Q5ST30 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
VARS2Q5ST30 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
VARS2Q5ST30 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
VARS2Q5ST30 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
VARS2Q5ST30 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
VARS2Q5ST30 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
VARS2Q5ST30 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
VARS2Q5ST30 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.45
VARS2Q5ST30 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
VARS2Q5ST30 AC091305.1-201ENST00000479476 895 ntBASIC24.08■■□□□ 1.45
VARS2Q5ST30 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
VARS2Q5ST30 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
VARS2Q5ST30 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
VARS2Q5ST30 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
VARS2Q5ST30 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.08■■□□□ 1.44
VARS2Q5ST30 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VARS2Q5ST30 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
VARS2Q5ST30 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms