Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ANKRD55Q3KP44 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ANKRD55Q3KP44 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ANKRD55Q3KP44 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 AC060814.1-201ENST00000554326 538 ntBASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ANKRD55Q3KP44 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.77■□□□□ 0.6
ANKRD55Q3KP44 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ANKRD55Q3KP44 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ANKRD55Q3KP44 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.77■□□□□ 0.6
ANKRD55Q3KP44 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ANKRD55Q3KP44 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ANKRD55Q3KP44 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.77■□□□□ 0.6
ANKRD55Q3KP44 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.77■□□□□ 0.6
ANKRD55Q3KP44 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ANKRD55Q3KP44 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
ANKRD55Q3KP44 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
ANKRD55Q3KP44 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.76■□□□□ 0.59
ANKRD55Q3KP44 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 AC242852.2-201ENST00000615738 1807 ntBASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 AC022413.1-201ENST00000624602 984 ntBASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ANKRD55Q3KP44 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 AL137060.1-201ENST00000618151 2648 ntBASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 RP9P-202ENST00000450133 1212 ntBASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ANKRD55Q3KP44 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 AC093536.1-201ENST00000569153 554 ntBASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ANKRD55Q3KP44 AL161729.1-201ENST00000604104 1402 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms