Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 C9orf163-202ENST00000624034 2573 ntBASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 BX664725.1-201ENST00000438252 379 ntBASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 AC021242.3-201ENST00000607598 1377 ntBASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 AC133561.1-201ENST00000568600 2415 ntBASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 AC092068.2-201ENST00000590491 1708 ntBASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.64■□□□□ 0.74
SNAI3Q3KNW1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
SNAI3Q3KNW1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 AC068473.5-201ENST00000616428 2072 ntBASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms