Protein–RNA interactions for Protein: Q12112

TY1B-NL1, Transposon Ty1-NL1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL1Q12112 HAP1YLR256W 4509 nt6.23□□□□□ -1.41
TY1B-NL1Q12112 SEC72YLR292C 582 nt6.23□□□□□ -1.41
TY1B-NL1Q12112 RDN5-6RDN5-6 121 nt6.23□□□□□ -1.41
TY1B-NL1Q12112 VHT1YGR065C 1782 nt6.22□□□□□ -1.41
TY1B-NL1Q12112 YDR090CYDR090C 933 nt6.22□□□□□ -1.41
TY1B-NL1Q12112 ZRT1YGL255W 1131 nt6.22□□□□□ -1.41
TY1B-NL1Q12112 MAL11YGR289C 1851 nt6.22□□□□□ -1.41
TY1B-NL1Q12112 VAN1YML115C 1608 nt6.22□□□□□ -1.41
TY1B-NL1Q12112 ASF2YDL197C 1578 nt6.22□□□□□ -1.41
TY1B-NL1Q12112 ENP1YBR247C 1452 nt6.22□□□□□ -1.41
TY1B-NL1Q12112 MTH1YDR277C 1302 nt6.21□□□□□ -1.41
TY1B-NL1Q12112 YGL199CYGL199C 471 nt6.21□□□□□ -1.41
TY1B-NL1Q12112 SDS3YIL084C 984 nt6.21□□□□□ -1.41
TY1B-NL1Q12112 ILV5YLR355C 1188 nt6.21□□□□□ -1.41
TY1B-NL1Q12112 SUM1YDR310C 3189 nt6.21□□□□□ -1.42
TY1B-NL1Q12112 MKK2YPL140C 1521 nt6.21□□□□□ -1.42
TY1B-NL1Q12112 YDR193WYDR193W 399 nt6.21□□□□□ -1.42
TY1B-NL1Q12112 AAD6YFL056C 639 nt6.21□□□□□ -1.42
TY1B-NL1Q12112 BUD17YNR027W 954 nt6.21□□□□□ -1.42
TY1B-NL1Q12112 CCZ1YBR131W 2115 nt6.21□□□□□ -1.42
TY1B-NL1Q12112 CEX1YOR112W 2286 nt6.2□□□□□ -1.42
TY1B-NL1Q12112 tC(GCA)BtC(GCA)B 72 nt6.2□□□□□ -1.42
TY1B-NL1Q12112 tC(GCA)GtC(GCA)G 72 nt6.2□□□□□ -1.42
TY1B-NL1Q12112 tC(GCA)P1tC(GCA)P1 72 nt6.2□□□□□ -1.42
TY1B-NL1Q12112 tC(GCA)P2tC(GCA)P2 72 nt6.2□□□□□ -1.42
TY1B-NL1Q12112 AHA1YDR214W 1053 nt6.2□□□□□ -1.42
TY1B-NL1Q12112 YER187WYER187W 426 nt6.2□□□□□ -1.42
TY1B-NL1Q12112 YGR127WYGR127W 939 nt6.2□□□□□ -1.42
TY1B-NL1Q12112 VAS1YGR094W 3315 nt6.19□□□□□ -1.42
TY1B-NL1Q12112 YDL071CYDL071C 375 nt6.19□□□□□ -1.42
TY1B-NL1Q12112 LSB1YGR136W 726 nt6.19□□□□□ -1.42
TY1B-NL1Q12112 PGM2YMR105C 1710 nt6.19□□□□□ -1.42
TY1B-NL1Q12112 YGL214WYGL214W 486 nt6.18□□□□□ -1.42
TY1B-NL1Q12112 ECM33YBR078W 1290 nt6.18□□□□□ -1.42
TY1B-NL1Q12112 CTR1YPR124W 1221 nt6.18□□□□□ -1.42
TY1B-NL1Q12112 FMP32YFL046W 624 nt6.18□□□□□ -1.42
TY1B-NL1Q12112 ASI2YNL159C 870 nt6.18□□□□□ -1.42
TY1B-NL1Q12112 PTC1YDL006W 846 nt6.17□□□□□ -1.42
TY1B-NL1Q12112 MRP4YHL004W 1185 nt6.17□□□□□ -1.42
TY1B-NL1Q12112 RAD52YML032C 1416 nt6.17□□□□□ -1.42
TY1B-NL1Q12112 CDC48YDL126C 2508 nt6.17□□□□□ -1.42
TY1B-NL1Q12112 RAD4YER162C 2265 nt6.17□□□□□ -1.42
TY1B-NL1Q12112 IMA3YIL172C 1770 nt6.17□□□□□ -1.42
TY1B-NL1Q12112 IMA4YJL221C 1770 nt6.17□□□□□ -1.42
TY1B-NL1Q12112 FAR8YMR029C 1572 nt6.16□□□□□ -1.42
TY1B-NL1Q12112 IES6YEL044W 501 nt6.16□□□□□ -1.42
TY1B-NL1Q12112 YIL021C-AYIL021C-A 270 nt6.16□□□□□ -1.42
TY1B-NL1Q12112 GVP36YIL041W 981 nt6.16□□□□□ -1.42
TY1B-NL1Q12112 FAR10YLR238W 1437 nt6.16□□□□□ -1.42
TY1B-NL1Q12112 PER1YCR044C 1074 nt6.16□□□□□ -1.42
TY1B-NL1Q12112 TRS120YDR407C 3870 nt6.15□□□□□ -1.42
TY1B-NL1Q12112 PEP5YMR231W 3090 nt6.15□□□□□ -1.42
TY1B-NL1Q12112 BUD13YGL174W 801 nt6.15□□□□□ -1.43
TY1B-NL1Q12112 YIL152WYIL152W 708 nt6.15□□□□□ -1.43
TY1B-NL1Q12112 CDC42YLR229C 576 nt6.15□□□□□ -1.43
TY1B-NL1Q12112 YOS9YDR057W 1629 nt6.14□□□□□ -1.43
TY1B-NL1Q12112 YDC1YPL087W 954 nt6.14□□□□□ -1.43
TY1B-NL1Q12112 SIR2YDL042C 1689 nt6.14□□□□□ -1.43
TY1B-NL1Q12112 MNT2YGL257C 1677 nt6.14□□□□□ -1.43
TY1B-NL1Q12112 RSF2YJR127C 4143 nt6.14□□□□□ -1.43
TY1B-NL1Q12112 YJL206CYJL206C 2277 nt6.14□□□□□ -1.43
TY1B-NL1Q12112 HIS6YIL020C 786 nt6.13□□□□□ -1.43
TY1B-NL1Q12112 YJR112W-AYJR112W-A 330 nt6.13□□□□□ -1.43
TY1B-NL1Q12112 YBR053CYBR053C 1077 nt6.13□□□□□ -1.43
TY1B-NL1Q12112 YLR446WYLR446W 1302 nt6.13□□□□□ -1.43
TY1B-NL1Q12112 EAR1YMR171C 1653 nt6.13□□□□□ -1.43
TY1B-NL1Q12112 SEC2YNL272C 2280 nt6.12□□□□□ -1.43
TY1B-NL1Q12112 SNT1YCR033W 3681 nt6.12□□□□□ -1.43
TY1B-NL1Q12112 MST1YKL194C 1389 nt6.11□□□□□ -1.43
TY1B-NL1Q12112 TRP1YDR007W 675 nt6.11□□□□□ -1.43
TY1B-NL1Q12112 HNT2YDR305C 654 nt6.11□□□□□ -1.43
TY1B-NL1Q12112 TFB3YDR460W 966 nt6.11□□□□□ -1.43
TY1B-NL1Q12112 RAD27YKL113C 1149 nt6.11□□□□□ -1.43
TY1B-NL1Q12112 PAL1YDR348C 1500 nt6.11□□□□□ -1.43
TY1B-NL1Q12112 YEL020CYEL020C 1683 nt6.11□□□□□ -1.43
TY1B-NL1Q12112 RNA15YGL044C 891 nt6.11□□□□□ -1.43
TY1B-NL1Q12112 RPS0AYGR214W 759 nt6.11□□□□□ -1.43
TY1B-NL1Q12112 TRF5YNL299W 1929 nt6.1□□□□□ -1.43
TY1B-NL1Q12112 CRT10YOL063C 2874 nt6.1□□□□□ -1.43
TY1B-NL1Q12112 PDR15YDR406W 4590 nt6.1□□□□□ -1.43
TY1B-NL1Q12112 YKL162C-AYKL162C-A 153 nt6.1□□□□□ -1.43
TY1B-NL1Q12112 PPQ1YPL179W 1650 nt6.1□□□□□ -1.43
TY1B-NL1Q12112 LAS1YKR063C 1509 nt6.1□□□□□ -1.43
TY1B-NL1Q12112 PMT5YDL093W 2232 nt6.09□□□□□ -1.43
TY1B-NL1Q12112 USA1YML029W 2517 nt6.09□□□□□ -1.43
TY1B-NL1Q12112 GDA1YEL042W 1557 nt6.09□□□□□ -1.43
TY1B-NL1Q12112 DNF2YDR093W 4839 nt6.09□□□□□ -1.43
TY1B-NL1Q12112 PAH1YMR165C 2589 nt6.09□□□□□ -1.44
TY1B-NL1Q12112 SSH1YBR283C 1473 nt6.08□□□□□ -1.44
TY1B-NL1Q12112 YJL193WYJL193W 1209 nt6.08□□□□□ -1.44
TY1B-NL1Q12112 BUB3YOR026W 1026 nt6.08□□□□□ -1.44
TY1B-NL1Q12112 YTA7YGR270W 4140 nt6.08□□□□□ -1.44
TY1B-NL1Q12112 SPC19YDR201W 498 nt6.08□□□□□ -1.44
TY1B-NL1Q12112 HFD1YMR110C 1599 nt6.08□□□□□ -1.44
TY1B-NL1Q12112 YIL171WYIL171W 330 nt6.07□□□□□ -1.44
TY1B-NL1Q12112 KRE9YJL174W 831 nt6.07□□□□□ -1.44
TY1B-NL1Q12112 DBP9YLR276C 1785 nt6.07□□□□□ -1.44
TY1B-NL1Q12112 GPI13YLL031C 3054 nt6.07□□□□□ -1.44
TY1B-NL1Q12112 RCM1YNL022C 1473 nt6.07□□□□□ -1.44
TY1B-NL1Q12112 ERP2YAL007C 648 nt6.06□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms