Protein–RNA interactions for Protein: Q08962

NIP7, 60S ribosome subunit biogenesis protein NIP7, yeastyeast

Known RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP7Q08962 YFR034W-AYFR034W-A 288 nt3.98□□□□□ -1.77
NIP7Q08962 YNL194CYNL194C 906 nt3.98□□□□□ -1.77
NIP7Q08962 ALD3YMR169C 1521 nt3.98□□□□□ -1.77
NIP7Q08962 ALD2YMR170C 1521 nt3.98□□□□□ -1.77
NIP7Q08962 BSC5YNR069C 1470 nt3.98□□□□□ -1.77
NIP7Q08962 FAA4YMR246W 2085 nt3.98□□□□□ -1.77
NIP7Q08962 SAF1YBR280C 1914 nt3.97□□□□□ -1.77
NIP7Q08962 GAD1YMR250W 1758 nt3.97□□□□□ -1.77
NIP7Q08962 ASK10YGR097W 3441 nt3.97□□□□□ -1.77
NIP7Q08962 SEC9YGR009C 1956 nt3.97□□□□□ -1.77
NIP7Q08962 YEL045CYEL045C 426 nt3.97□□□□□ -1.77
NIP7Q08962 YFR035CYFR035C 345 nt3.97□□□□□ -1.77
NIP7Q08962 YHR193C-AYHR193C-A 375 nt3.97□□□□□ -1.77
NIP7Q08962 UBI4YLL039C 1146 nt3.97□□□□□ -1.77
NIP7Q08962 CCS1YMR038C 750 nt3.97□□□□□ -1.77
NIP7Q08962 URE2YNL229C 1065 nt3.97□□□□□ -1.77
NIP7Q08962 RFA2YNL312W 822 nt3.97□□□□□ -1.77
NIP7Q08962 MRP21YBL090W 534 nt3.97□□□□□ -1.77
NIP7Q08962 ECM23YPL021W 564 nt3.97□□□□□ -1.77
NIP7Q08962 PCL8YPL219W 1479 nt3.97□□□□□ -1.77
NIP7Q08962 MBP1YDL056W 2502 nt3.96□□□□□ -1.77
NIP7Q08962 YTA6YPL074W 2265 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)CtK(CUU)C 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)D1tK(CUU)D1 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)D2tK(CUU)D2 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)E1tK(CUU)E1 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)E2tK(CUU)E2 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)FtK(CUU)F 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)G1tK(CUU)G1 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)G2tK(CUU)G2 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)G3tK(CUU)G3 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)ItK(CUU)I 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)JtK(CUU)J 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)KtK(CUU)K 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)MtK(CUU)M 73 nt3.96□□□□□ -1.78
NIP7Q08962 tK(CUU)PtK(CUU)P 73 nt3.96□□□□□ -1.78
NIP7Q08962 YGR122WYGR122W 1209 nt3.96□□□□□ -1.78
NIP7Q08962 CIA2YHR122W 696 nt3.96□□□□□ -1.78
NIP7Q08962 LSO1YJR005C-A 282 nt3.96□□□□□ -1.78
NIP7Q08962 YAL047W-AYAL047W-A 330 nt3.96□□□□□ -1.78
NIP7Q08962 YLR346CYLR346C 306 nt3.96□□□□□ -1.78
NIP7Q08962 MAC1YMR021C 1254 nt3.96□□□□□ -1.78
NIP7Q08962 RCL1YOL010W 1104 nt3.96□□□□□ -1.78
NIP7Q08962 PRP43YGL120C 2304 nt3.96□□□□□ -1.78
NIP7Q08962 MRE11YMR224C 2079 nt3.96□□□□□ -1.78
NIP7Q08962 MET3YJR010W 1536 nt3.95□□□□□ -1.78
NIP7Q08962 YER158CYER158C 1722 nt3.95□□□□□ -1.78
NIP7Q08962 YER145C-AYER145C-A 438 nt3.95□□□□□ -1.78
NIP7Q08962 RNA15YGL044C 891 nt3.95□□□□□ -1.78
NIP7Q08962 YIL165CYIL165C 360 nt3.95□□□□□ -1.78
NIP7Q08962 SMA1YPL027W 738 nt3.95□□□□□ -1.78
NIP7Q08962 UBP7YIL156W 3216 nt3.95□□□□□ -1.78
NIP7Q08962 GPR1YDL035C 2886 nt3.95□□□□□ -1.78
NIP7Q08962 YDR261C-DYDR261C-D 4815 nt3.95□□□□□ -1.78
NIP7Q08962 NMD3YHR170W 1557 nt3.94□□□□□ -1.78
NIP7Q08962 AI5_BETAQ0075 1065 nt3.94□□□□□ -1.78
NIP7Q08962 YEL009C-AYEL009C-A 408 nt3.94□□□□□ -1.78
NIP7Q08962 YHR214WYHR214W 612 nt3.94□□□□□ -1.78
NIP7Q08962 YAR066WYAR066W 612 nt3.94□□□□□ -1.78
NIP7Q08962 YPR071WYPR071W 636 nt3.94□□□□□ -1.78
NIP7Q08962 PHO90YJL198W 2646 nt3.93□□□□□ -1.78
NIP7Q08962 SAP155YFR040W 3009 nt3.93□□□□□ -1.78
NIP7Q08962 FPK1YNR047W 2682 nt3.93□□□□□ -1.78
NIP7Q08962 SSH4YKL124W 1740 nt3.93□□□□□ -1.78
NIP7Q08962 CBP1YJL209W 1965 nt3.93□□□□□ -1.78
NIP7Q08962 NAT2YGR147C 867 nt3.93□□□□□ -1.78
NIP7Q08962 DBR1YKL149C 1218 nt3.93□□□□□ -1.78
NIP7Q08962 TOM40YMR203W 1164 nt3.93□□□□□ -1.78
NIP7Q08962 PCL1YNL289W 840 nt3.93□□□□□ -1.78
NIP7Q08962 REI1YBR267W 1182 nt3.93□□□□□ -1.78
NIP7Q08962 ERG4YGL012W 1422 nt3.93□□□□□ -1.78
NIP7Q08962 VHS2YIL135C 1311 nt3.93□□□□□ -1.78
NIP7Q08962 GSY1YFR015C 2127 nt3.92□□□□□ -1.78
NIP7Q08962 ARN1YHL040C 1884 nt3.92□□□□□ -1.78
NIP7Q08962 KRS1YDR037W 1776 nt3.92□□□□□ -1.78
NIP7Q08962 DPH6YLR143W 2058 nt3.92□□□□□ -1.78
NIP7Q08962 GLE2YER107C 1098 nt3.92□□□□□ -1.78
NIP7Q08962 RMR1YGL250W 726 nt3.92□□□□□ -1.78
NIP7Q08962 GPP1YIL053W 753 nt3.92□□□□□ -1.78
NIP7Q08962 OAZ1YPL052W 879 nt3.92□□□□□ -1.78
NIP7Q08962 HPC2YBR215W 1878 nt3.92□□□□□ -1.78
NIP7Q08962 IML2YJL082W 2196 nt3.92□□□□□ -1.78
NIP7Q08962 YEH2YLR020C 1617 nt3.92□□□□□ -1.78
NIP7Q08962 ATH1YPR026W 3636 nt3.91□□□□□ -1.78
NIP7Q08962 TPS3YMR261C 3165 nt3.91□□□□□ -1.78
NIP7Q08962 snR7-SsnR7-S 179 nt3.91□□□□□ -1.78
NIP7Q08962 HLJ1YMR161W 675 nt3.91□□□□□ -1.78
NIP7Q08962 YOR292CYOR292C 930 nt3.91□□□□□ -1.78
NIP7Q08962 ICY2YPL250C 411 nt3.91□□□□□ -1.78
NIP7Q08962 MNN4YKL201C 3537 nt3.91□□□□□ -1.78
NIP7Q08962 PXA1YPL147W 2613 nt3.91□□□□□ -1.78
NIP7Q08962 EAR1YMR171C 1653 nt3.9□□□□□ -1.78
NIP7Q08962 SLD2YKL108W 1362 nt3.9□□□□□ -1.78
NIP7Q08962 CLB4YLR210W 1383 nt3.9□□□□□ -1.78
NIP7Q08962 CAB3YKL088W 1716 nt3.9□□□□□ -1.78
NIP7Q08962 PGM2YMR105C 1710 nt3.9□□□□□ -1.78
NIP7Q08962 HIS4YCL030C 2400 nt3.9□□□□□ -1.78
NIP7Q08962 CAF4YKR036C 1932 nt3.9□□□□□ -1.78
NIP7Q08962 EGT2YNL327W 3126 nt3.9□□□□□ -1.79
NIP7Q08962 NUP42YDR192C 1293 nt3.9□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms