Protein–RNA interactions for Protein: Q07887

LDB18, Protein LDB18, yeastyeast

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB18Q07887 tK(CUU)FtK(CUU)F 73 nt4.44□□□□□ -1.7
LDB18Q07887 tK(CUU)G1tK(CUU)G1 73 nt4.44□□□□□ -1.7
LDB18Q07887 tK(CUU)G2tK(CUU)G2 73 nt4.44□□□□□ -1.7
LDB18Q07887 tK(CUU)G3tK(CUU)G3 73 nt4.44□□□□□ -1.7
LDB18Q07887 tK(CUU)ItK(CUU)I 73 nt4.44□□□□□ -1.7
LDB18Q07887 tK(CUU)JtK(CUU)J 73 nt4.44□□□□□ -1.7
LDB18Q07887 tK(CUU)KtK(CUU)K 73 nt4.44□□□□□ -1.7
LDB18Q07887 tK(CUU)MtK(CUU)M 73 nt4.44□□□□□ -1.7
LDB18Q07887 tK(CUU)PtK(CUU)P 73 nt4.44□□□□□ -1.7
LDB18Q07887 FMP33YJL161W 543 nt4.44□□□□□ -1.7
LDB18Q07887 NMD4YLR363C 657 nt4.44□□□□□ -1.7
LDB18Q07887 VHC1YBR235W 3363 nt4.44□□□□□ -1.7
LDB18Q07887 CAB3YKL088W 1716 nt4.43□□□□□ -1.7
LDB18Q07887 ZPR1YGR211W 1461 nt4.43□□□□□ -1.7
LDB18Q07887 GSY1YFR015C 2127 nt4.43□□□□□ -1.7
LDB18Q07887 AIM17YHL021C 1398 nt4.43□□□□□ -1.7
LDB18Q07887 YHR140WYHR140W 720 nt4.43□□□□□ -1.7
LDB18Q07887 RFC2YJR068W 1062 nt4.43□□□□□ -1.7
LDB18Q07887 YPL278CYPL278C 303 nt4.43□□□□□ -1.7
LDB18Q07887 MPH2YDL247W 1830 nt4.43□□□□□ -1.7
LDB18Q07887 SWC3YAL011W 1878 nt4.43□□□□□ -1.7
LDB18Q07887 NAT2YGR147C 867 nt4.42□□□□□ -1.7
LDB18Q07887 YHR212W-AYHR212W-A 204 nt4.42□□□□□ -1.7
LDB18Q07887 YAR061WYAR061W 204 nt4.42□□□□□ -1.7
LDB18Q07887 YNL057WYNL057W 333 nt4.42□□□□□ -1.7
LDB18Q07887 YNL217WYNL217W 981 nt4.42□□□□□ -1.7
LDB18Q07887 CDC21YOR074C 915 nt4.42□□□□□ -1.7
LDB18Q07887 CLA4YNL298W 2529 nt4.42□□□□□ -1.7
LDB18Q07887 YMR221CYMR221C 1515 nt4.41□□□□□ -1.7
LDB18Q07887 HRK1YOR267C 2280 nt4.41□□□□□ -1.7
LDB18Q07887 NUP42YDR192C 1293 nt4.41□□□□□ -1.7
LDB18Q07887 NPY1YGL067W 1155 nt4.41□□□□□ -1.7
LDB18Q07887 RMR1YGL250W 726 nt4.41□□□□□ -1.7
LDB18Q07887 YAR023CYAR023C 540 nt4.41□□□□□ -1.7
LDB18Q07887 RRN9YMR270C 1098 nt4.41□□□□□ -1.7
LDB18Q07887 YNG1YOR064C 660 nt4.41□□□□□ -1.7
LDB18Q07887 VID22YLR373C 2706 nt4.41□□□□□ -1.7
LDB18Q07887 EAR1YMR171C 1653 nt4.41□□□□□ -1.7
LDB18Q07887 TFG1YGR186W 2208 nt4.41□□□□□ -1.7
LDB18Q07887 MET12YPL023C 1974 nt4.4□□□□□ -1.7
LDB18Q07887 ATR1YML116W 1629 nt4.4□□□□□ -1.7
LDB18Q07887 snR7-SsnR7-S 179 nt4.4□□□□□ -1.71
LDB18Q07887 SPO19YPL130W 672 nt4.4□□□□□ -1.71
LDB18Q07887 TIF5YPR041W 1218 nt4.4□□□□□ -1.71
LDB18Q07887 SAC1YKL212W 1872 nt4.4□□□□□ -1.71
LDB18Q07887 CAF4YKR036C 1932 nt4.39□□□□□ -1.71
LDB18Q07887 RXT3YDL076C 885 nt4.39□□□□□ -1.71
LDB18Q07887 RPL34AYER056C-A 366 nt4.39□□□□□ -1.71
LDB18Q07887 MVD1YNR043W 1191 nt4.39□□□□□ -1.71
LDB18Q07887 IMD2YHR216W 1572 nt4.39□□□□□ -1.71
LDB18Q07887 LYP1YNL268W 1836 nt4.39□□□□□ -1.71
LDB18Q07887 YTA12YMR089C 2478 nt4.38□□□□□ -1.71
LDB18Q07887 PGM2YMR105C 1710 nt4.38□□□□□ -1.71
LDB18Q07887 MKS1YNL076W 1755 nt4.38□□□□□ -1.71
LDB18Q07887 LEU1YGL009C 2340 nt4.38□□□□□ -1.71
LDB18Q07887 GPP1YIL053W 753 nt4.38□□□□□ -1.71
LDB18Q07887 ISY1YJR050W 708 nt4.38□□□□□ -1.71
LDB18Q07887 HIS4YCL030C 2400 nt4.38□□□□□ -1.71
LDB18Q07887 HOT1YMR172W 2160 nt4.38□□□□□ -1.71
LDB18Q07887 NUP2YLR335W 2163 nt4.37□□□□□ -1.71
LDB18Q07887 FRA2YGL220W 363 nt4.37□□□□□ -1.71
LDB18Q07887 NTR2YKR022C 969 nt4.37□□□□□ -1.71
LDB18Q07887 YIM1YMR152W 1098 nt4.37□□□□□ -1.71
LDB18Q07887 ARC40YBR234C 1155 nt4.37□□□□□ -1.71
LDB18Q07887 CTT1YGR088W 1689 nt4.37□□□□□ -1.71
LDB18Q07887 IMA3YIL172C 1770 nt4.37□□□□□ -1.71
LDB18Q07887 IMA4YJL221C 1770 nt4.37□□□□□ -1.71
LDB18Q07887 ESF1YDR365C 1887 nt4.37□□□□□ -1.71
LDB18Q07887 VPS72YDR485C 2388 nt4.36□□□□□ -1.71
LDB18Q07887 MCM4YPR019W 2802 nt4.36□□□□□ -1.71
LDB18Q07887 PER1YCR044C 1074 nt4.36□□□□□ -1.71
LDB18Q07887 LYS5YGL154C 819 nt4.36□□□□□ -1.71
LDB18Q07887 CNB1YKL190W 528 nt4.36□□□□□ -1.71
LDB18Q07887 YML131WYML131W 1098 nt4.36□□□□□ -1.71
LDB18Q07887 COG5YNL051W 1212 nt4.36□□□□□ -1.71
LDB18Q07887 TPO2YGR138C 1845 nt4.36□□□□□ -1.71
LDB18Q07887 MDR1YGR100W 2853 nt4.36□□□□□ -1.71
LDB18Q07887 MNN4YKL201C 3537 nt4.36□□□□□ -1.71
LDB18Q07887 MEC3YLR288C 1425 nt4.36□□□□□ -1.71
LDB18Q07887 ALG2YGL065C 1512 nt4.36□□□□□ -1.71
LDB18Q07887 BOP2YLR267W 1713 nt4.35□□□□□ -1.71
LDB18Q07887 COQ4YDR204W 1008 nt4.35□□□□□ -1.71
LDB18Q07887 KRE28YDR532C 1158 nt4.35□□□□□ -1.71
LDB18Q07887 YOR379CYOR379C 339 nt4.35□□□□□ -1.71
LDB18Q07887 SUM1YDR310C 3189 nt4.35□□□□□ -1.71
LDB18Q07887 GCR1YPL075W 2358 nt4.34□□□□□ -1.71
LDB18Q07887 YHL049CYHL049C 816 nt4.34□□□□□ -1.71
LDB18Q07887 FMP46YKR049C 402 nt4.34□□□□□ -1.71
LDB18Q07887 NKP2YLR315W 462 nt4.34□□□□□ -1.71
LDB18Q07887 FBP1YLR377C 1047 nt4.34□□□□□ -1.71
LDB18Q07887 RER1YCL001W 567 nt4.34□□□□□ -1.71
LDB18Q07887 YIL001WYIL001W 1542 nt4.34□□□□□ -1.71
LDB18Q07887 JHD2YJR119C 2187 nt4.34□□□□□ -1.72
LDB18Q07887 GDE1YPL110C 3672 nt4.33□□□□□ -1.72
LDB18Q07887 NUP1YOR098C 3231 nt4.33□□□□□ -1.72
LDB18Q07887 SUL2YLR092W 2682 nt4.33□□□□□ -1.72
LDB18Q07887 PAH1YMR165C 2589 nt4.33□□□□□ -1.72
LDB18Q07887 AZR1YGR224W 1842 nt4.33□□□□□ -1.72
LDB18Q07887 YMR135W-AYMR135W-A 534 nt4.33□□□□□ -1.72
LDB18Q07887 YPL113CYPL113C 1191 nt4.33□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms